Lytechinus variegatus (green sea urchin): 121425853
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Entry
121425853 CDS
T11173
Name
(RefSeq) C-type lectin-like
KO
K06563
C-type lectin domain family 4 member L/M
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03260
Virion - Human immunodeficiency virus
lvg03264
Virion - Flavivirus and Alphavirus
lvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lvg03273
Virion - Lassa virus and SFTS virus
lvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
121425853
03264 Virion - Flavivirus and Alphavirus
121425853
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121425853
03273 Virion - Lassa virus and SFTS virus
121425853
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121425853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121425853
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121425853
04515 Cell adhesion molecules [BR:
lvg04515
]
121425853
04090 CD molecules [BR:
lvg04090
]
121425853
04091 Lectins [BR:
lvg04091
]
121425853
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
121425853
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
121425853
Cell adhesion molecules [BR:
lvg04515
]
Lectins
Selectins and C-type lectins
121425853
CD molecules [BR:
lvg04090
]
Proteins
121425853
Lectins [BR:
lvg04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
121425853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
EGF
EGF_laminin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
121425853
NCBI-ProteinID:
XP_041477867
LinkDB
All DBs
Position
13:31262590..31270038
Genome browser
AA seq
222 aa
AA seq
DB search
MTGYQCHCLEGYSGKQCMVHEQGNTESSESRSSEPSTTTNTTMTLTTGGTNTTESLDPLP
NCAGLSRCPHGWLPGEGKCYSFPKKRVRILNEAVNDCDKRSVFTYRGTVMRPSLMVPESE
SEVQILWHCVLPHIQQRKSHQCYWINCKRVSDGDGKFSCRTTRRGNTTDYRNWVEGEPDN
WDNSEDCAIMNDKPRHLEWSDIPCNYIFHYCDLYYACQIHVT
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgactggttaccagtgtcactgcctcgaagggtattctgggaagcaatgcatggtacat
gaacaaggtaacacagaatcttcagaatctcgttcgagtgagccttctaccaccactaac
accacaatgacactcacaacaggtggaacaaacaccactgaatctctggatcctctgccg
aattgcgccggcctttcacgttgtccccatggttggctgccgggggaggggaaatgttac
agttttcctaaaaaaagagtccgcattttgaatgaagctgttaacgactgcgacaagagg
tctgtgttcacgtatagagggacggtaatgcgcccctctctaatggtcccggagagtgag
agcgaagttcaaattctttggcactgcgttttgccgcatattcagcaaagaaaaagtcac
caatgttactggatcaactgcaaacgtgtctctgacggtgatggcaaattttcctgccgt
acaacaagacgaggaaacactacagattaccgaaattgggtggagggagagccggacaac
tgggacaactctgaagactgcgccatcatgaatgataagcctagacacctcgaatggagt
gacatcccctgcaactacatatttcattactgtgatttgtattatgcatgtcaaatacat
gtgacctaa
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