Lytechinus variegatus (green sea urchin): 121428132
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Entry
121428132 CDS
T11173
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lvg
Lytechinus variegatus (green sea urchin)
Pathway
lvg00514
Other types of O-glycan biosynthesis
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121428132
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121428132
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121428132
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121428132
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
O-Glycan
121428132
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121428132
NCBI-ProteinID:
XP_041480659
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All DBs
Position
14:complement(21994308..22011173)
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AA seq
417 aa
AA seq
DB search
MRDDDDTMTRYTCGKTLKIVFGASYVLMVFLVIKHQLRAYPGVKPRSVYDDDLRPPSRGA
DRAPLSHGRSRDEMSGNRLGYDDGGVDNIRVNGGVRESTRMKIQTTNEEDAVWDKLLLGP
AKSPSKSNSSSGKPGKGVYISPKLPDYRPTDISDLFIGVKTTGAYHSSRVQLILDTWHSF
APEQIYFFTDVKDPVYQEKTNGHMVNTDCPDTHKLTALACKTSSIFTMFEKIKDKRWLCH
VDDDNYLNVPELLRFLNHFDHHQELYFGRESINYRTLAIDRDTNETYRFWFATGGGGVCF
SQPLTYRMMKYTSKGNLAKTAEKIGRPDDITIGFIVEILLGKSLTRVRKFNSHIQKMSDI
PTRDLIKQITLSYCLNDRRELGPNVIDFRPIMEDDPTRFKSFHCSYYRKFGGTCPYD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgatgatgacacgatgactcggtacacttgcggaaaaactctgaaaattgtg
ttcggggcatcgtatgtcctgatggtgtttcttgtaatcaaacaccagcttcgtgcctat
cctggagtgaaacccaggagcgtgtatgacgatgatctacggcccccttcccgcggggcg
gaccgtgcgccacttagccatggacggtcgcgtgatgagatgtcgggcaaccgcttaggc
tacgatgacggtggcgttgacaacatccgtgtcaacggaggtgttcgtgaatccacacga
atgaagattcaaactactaatgaagaggatgccgtatgggacaaacttctgcttggccca
gcgaagtctccttcgaaatcaaattcctcttcggggaaacctggcaagggggtttatatc
tcgccaaagctgccagattacagacccacagatatatcggatctgttcatcggcgttaag
acgaccggggcgtaccacagcagccgggtccagctcattctggacacctggcattcgttt
gctccagagcagatatattttttcaccgacgtgaaagatcctgtttatcaggagaaaacg
aatggtcacatggtcaacactgattgtccagatacgcacaaattgaccgcccttgcctgt
aaaacatcaagcatattcaccatgtttgaaaagataaaagacaaaaggtggctgtgccac
gttgatgacgacaactatctaaatgttccagagctgttaaggttcctgaaccatttcgat
caccaccaagagctttacttcgggcgagaaagcatcaattaccggacgctcgcaatagat
agagatacaaatgagacatataggttctggtttgcaacaggagggggaggagtttgcttc
agccagcctctaacttacaggatgatgaagtatacaagcaaaggtaatttggcaaaaact
gccgagaagataggtcgaccggatgacatcactattggatttattgtagaaatcttattg
gggaagtccttgacgagagttcgcaaattcaattctcatatccagaagatgtccgacatt
ccaacgcgtgatctcataaagcagattaccctgagttactgtcttaatgataggagagag
ctaggacccaatgtgatcgattttcgaccgataatggaagacgatcctaccagatttaag
tcattccactgttcctactaccgtaaatttggcggtacctgcccttacgactaa
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