Lytechinus variegatus (green sea urchin): 121428384
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Entry
121428384 CDS
T11173
Name
(RefSeq) perlucin-like protein
KO
K06563
C-type lectin domain family 4 member L/M
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03260
Virion - Human immunodeficiency virus
lvg03264
Virion - Flavivirus and Alphavirus
lvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lvg03273
Virion - Lassa virus and SFTS virus
lvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
121428384
03264 Virion - Flavivirus and Alphavirus
121428384
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121428384
03273 Virion - Lassa virus and SFTS virus
121428384
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121428384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121428384
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121428384
04515 Cell adhesion molecules [BR:
lvg04515
]
121428384
04090 CD molecules [BR:
lvg04090
]
121428384
04091 Lectins [BR:
lvg04091
]
121428384
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
121428384
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
121428384
Cell adhesion molecules [BR:
lvg04515
]
Lectins
Selectins and C-type lectins
121428384
CD molecules [BR:
lvg04090
]
Proteins
121428384
Lectins [BR:
lvg04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
121428384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
EutA
Motif
Other DBs
NCBI-GeneID:
121428384
NCBI-ProteinID:
XP_041480907
LinkDB
All DBs
Position
15:complement(25971268..25974903)
Genome browser
AA seq
184 aa
AA seq
DB search
MLLITIATVFLFSCDTALARTEDVNKDAANALYTLTEKCSYYNCPDNWPPRSPGKSSCYM
YFHKGKNWASAEKSCRDVGGQLVKFDNQNEITDVANFLKSYYGIKAIPWMWTGLNDRSSE
GRYRWTGFGGELSRGSSMWANGQPDNHRPWWAWWDDEDCVEFNGKQLNDQDCDEGRAYVC
EFIP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcatcaccatagcaactgtgtttttgttcagctgtgatactgccctcgctagg
acagaggatgtcaacaaggatgctgccaatgcactctacactctgactgagaaatgtagc
tattataactgcccagataattggccaccacgatcccctggaaagtcctcttgctacatg
tacttccacaagggaaagaactgggcaagcgctgaaaagagctgccgcgacgtgggcggg
caacttgtcaagttcgacaaccagaatgagataaccgatgtcgccaatttcctcaagtcc
tactacggcatcaaagccatcccttggatgtggaccggtctgaatgaccgtagcagcgag
gggcggtaccgatggactggcttcggaggagaactgagcagagggagctccatgtgggcc
aatgggcagccggacaaccacaggccatggtgggcttggtgggatgatgaagattgcgta
gagttcaacgggaaacagctcaacgaccaagattgtgatgagggacgtgcgtacgtctgc
gagttcatcccttag
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