Lytechinus variegatus (green sea urchin): 121429456
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Entry
121429456 CDS
T11173
Name
(RefSeq) integrator complex subunit 4-like
KO
K13141
integrator complex subunit 4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121429456
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121429456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
INTS4_C
HEAT
HEAT_2
Cnd1
PDS5
Adaptin_N
HEAT_MROH2B_C
VPS15-like_hel
CLASP_N
TPR_DNAAF5
HEAT_EF3_N
TPR_SYO1
Motif
Other DBs
NCBI-GeneID:
121429456
NCBI-ProteinID:
XP_041482405
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All DBs
Position
16:complement(30728236..30749733)
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AA seq
974 aa
AA seq
DB search
MAAHLKKRAYEEFSQIIQDEPKAPPIKVRLVARPQVTQVTLDLRAGNSREALTQLLDLEN
QLPVSQDAAESIINTLFEHYSKEEGAHVRSKVIELLGRIARLPGVNAVGIANDLMTLLAT
EGSHKVKGQIFTTLTVIGRSLPLTSDLHRQLLQLAQKHLTDSNHAVRCATLSMIGQLGMC
DVKSVASSSSSSSGKSSKERRKGNVQRMLGEFTSDRDARVREAAFQAMFSLHQRGQKLDL
DLYQQSIKSLTDDHEGVRLVALKLVWVLSQVYPDEPVVAPGTTEETLRLVDDGFAKICEM
VTDSSTKVRAEAAGLLGSLHSVSTRFLEQTLDKKLMSGLRKKKTAHERQKEQFTSGEWST
GKKWADDKPQEDVDPESVSLITSGACGAFVHGLEDEYLEVRSTALDSLCELAFQSPSFAI
LSLDFLVDMFNDEIESVRLNAIHSLRKINHHIKLREDQLEIILNVLDDSSKEVREALHEL
LSSIAMVTKSCLHKALMFLIRNLNKYPHDRLSIWNCLKNLGTAHPDLTLALVPDLLGTHP
YFDTPEPDMDDPAYIAVMIMILNSAVNSPTMSALFPEYTFRHYTYLRDSLPHLVPEVENL
QPARRQCLSNRGDNMADRQTNPQDFLQQTLDKLKGLDSLSNSAAINIMQLTVQDLQRISE
LEPKITATAQLYSMYIDCQLTLAKALSGDHWNVPAMLCPQQSAETALAASERVIELSYRL
QHLYVGCSESELAMVQQLRLRAWALQLVVQLRGSSSNSGSSGSSSSHLAQKFLTRASAMQ
EHFSSATITPDSFTHAVFTQVLKLSAARHGILTKFLQPLLLHNRAPVLSLANTISRVSAV
IREPAGGSDNPLRFTAGLTLGLFVDAELENVRDLERVRIQVRFPDSRTQLFIPRSSDFRI
LSNLRHRFMTEIYLSHGLWSEPSQVEVSIVMTHDLHGSGPSTSSKGESSSSSSRGTVELC
KPVKVFLMPKPAKR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcatctgaagaaacgtgcatatgaggagtttagccaaataattcaggatgag
cccaaggcacctccgattaaggtgagacttgtagcccgacctcaggtgacccaggtcacc
cttgatctgagggctggtaattccagagaggcccttactcagctgcttgatctagagaac
cagctaccagtcagtcaagatgcggcagagagtattatcaacactctttttgagcactac
agcaaagaggaaggagctcatgtaaggtcaaaggtcattgaattattgggtcgaattgcc
agactcccgggtgtgaacgctgtgggcatcgccaatgatctgatgacgctcttagccacc
gaaggttctcacaaggtcaaaggtcaaatatttaccacactcactgtgattggccgaagc
cttccgctcacctccgatctccaccgtcagcttctgcaacttgctcaaaaacatttaacc
gactcaaaccatgcagtacgatgtgctaccctgagcatgattggccagcttggtatgtgc
gacgtcaaatctgtggcatcatcgtcgtcatcgtcctctggaaagagtagcaaggaacgt
cgcaaaggcaatgtacaaaggatgctgggagagtttacaagcgatagggacgcacgggtc
agggaagctgctttccaagctatgttttccctacaccagcgagggcagaaactagaccta
gacctctaccagcaatccatcaagtccttgacggatgaccatgaaggggtccgactggtt
gcactcaaactagtctgggtcctgagtcaggtctaccctgacgagcctgttgtggctcct
ggaaccacggaggagaccctgaggcttgttgatgatggttttgccaagatctgtgagatg
gtgacggattcctcaaccaaggttcgagcggaagcagcgggtctcctgggctcgttgcat
tccgtcagtaccaggtttctggagcagactctggataagaaattaatgtcaggactccgg
aaaaagaaaactgcgcatgaaagacagaaggagcagttcacatcaggggagtggtcgact
ggtaagaaatgggccgatgacaagccgcaggaggatgtggaccctgaatctgtgagtctg
ataacgtctggggcttgtggggccttcgtccatggtctggaagatgaatatttagaggtc
agatccactgctttagactccctctgtgagcttgcattccagtcgccatccttcgccatc
ctctccctcgacttcctcgtcgacatgttcaatgatgagatcgagagtgtccgtctgaac
gccatccacagtctacgaaagatcaaccatcacatcaaattaagagaagaccagctcgag
attattttgaatgttcttgatgattcctcaaaggaagtgagggaggctcttcatgagctg
ctgtcatccattgccatggtaaccaagtcctgcctccacaaggctctaatgttcctcatc
agaaatctcaacaagtatccccatgataggctctcaatatggaactgtttgaagaacctt
ggtactgcccacccagacctaaccttagccttggtaccagacctccttggcactcatcct
tactttgatacaccagaaccagacatggacgacccggcctacattgcagtgatgattatg
atcctcaactcggcagtcaactcccctaccatgtccgccctgtttccagagtacactttc
agacattatacctatctgagggactccctaccgcaccttgtacctgaagtagagaacctt
caaccagcccggagacagtgtctttctaacagaggagacaatatggctgacaggcagacc
aatcctcaagacttcttacaacagactttagataaactcaaaggtctggatagtctgtct
aactcggctgccatcaacatcatgcagctcactgttcaggatttacaacgtatcagtgag
ttagaacccaagataacagctacggcccagttatattccatgtacatcgactgtcaactc
actctagcaaaggcattgagcggtgatcattggaacgtcccagccatgctttgccctcaa
cagagcgccgagactgctcttgctgcttcagaaagggtaatagaattaagctacagactt
cagcatctttacgttggttgcagcgagtccgagcttgccatggttcaacaactccgactt
cgggcctgggccctgcaacttgtggttcagctcagggggagcagcagcaacagtggtagc
agtggtagctcgtccagtcatctggcacagaagttcctgacgagagcatcagcaatgcaa
gaacacttctcatcagcgaccatcacaccagattcgttcacacatgccgttttcactcag
gttctgaagctgtcagcggcgaggcacggcatcctcaccaaattccttcagccacttctc
cttcacaaccgagctccagtcttgagcctcgccaacacgatcagccgtgtctcggcggtg
atccgtgagcctgcaggcgggagcgacaatcctttgcgattcaccgctggactcactctt
gggctgtttgtggacgcggagctggagaatgtgcgtgacttggaacgagttagaattcag
gtgcgtttcccggactcccggacgcaactcttcatccctcgtagtagcgacttcagaatc
ctgagcaacctcagacatcgcttcatgactgaaatctacctatcgcacggtctgtggtca
gaaccaagtcaggtcgaggtcagtattgtcatgacacatgaccttcatggatcgggccct
tccacttcatcaaaaggggagtcatcatcgagtagcagtagagggaccgtggagctttgt
aaacctgtgaaggtgttcttaatgcccaagccagccaagagatga
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