Lytechinus variegatus (green sea urchin): 121429886
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Entry
121429886 CDS
T11173
Name
(RefSeq) integrator complex subunit 4-like
KO
K13141
integrator complex subunit 4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121429886
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121429886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
INTS4_C
HEAT
HEAT_2
Cnd1
Adaptin_N
PDS5
HEAT_MROH2B_C
VPS15-like_hel
CLASP_N
TPR_DNAAF5
HEAT_EF3_N
TPR_SYO1
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
121429886
NCBI-ProteinID:
XP_041483076
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All DBs
Position
16:31353437..31374892
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AA seq
977 aa
AA seq
DB search
MAAHLKKRAYEEFSQIIQDEPKAPPIKVRLVARPQVTQVTLDLRAGNSREALTQLLDLEN
QLPVSQDAAESIINTLFEHYSKEEGAHVRSKVIELLGRIARLPGVNAVGIANDLMTLLAT
EGSHKVKGQIFTTLTVIGRSLPLTSDLHRQLLQLAQKHLTDSNHAVRCATLSMIGQLGMC
DVKSVASSSSSSSSSSGKSSKERRKGNVQRMLGEFTSDRDARVREAAFQAMFSLHQRGQK
LDLDLYQQSIKSLTDDHEGVRLVALKLVWVLSQVYPDEPVVAPGTTEETLRLVDDGFAKI
CEMVTDSSTKVRAEAAGLLGSLHSVSTRFLEQTLDKKLMSGLRKKKTAHERQKEQFTSGE
WSTGKKWADDKPQEDVDPESVSLITSGACGAFVHGLEDEYLEVRSTALDSLCELAFQSPS
FAILSLDFLVDMFNDEIESVRLNAIHSLRKINHHIKLREDQLEIILNVLDDSSKEVREAL
HELLSSIAMVTKSCLHKALMFLIRNLNKYPHDRLSIWNCLKNLGTAHPDLTLALVPDLLG
THPYFDTPEPDMDDPAYIAVMIMILNSAVNSPTMSALFPEYTFRHYTYLRDSLPHLVPEV
ENLQPARRQCLSNRGDNMADRQTNPQDFLQQTLDKLKGLDSLSNSAAINIMQLTVQDLQR
ISDLEPKITATAQLYSMYIDCQLTLAKALSGDHWNVPAMLCPQQSAETALAASERVIELS
YRLQHLYVGCSESELAMVQQLRLRAWALQLVVQLRGSSSNSGSSGSSSSHLAQKFLTRAS
AMQEHFSSATITPDSFTHAVFTQVLKLSAARHGILTKFLQPLLLHNRAPVLSLANTISRV
SAVIREPAGGSDNPLRFTAGLTLGLFVDAELENVRDLERVRIQVRFPDSRTQLFIPRSSD
FRILSNLRHRFMTEIYLSHGLWSEPSQVEVSIVMTHDLHGSGPSTSSKGESPSSSSRGTV
ELCKPVKVFLMPKPAKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcatctgaagaaacgtgcatatgaggagtttagccaaataattcaggatgag
cccaaggcacctccgattaaggtgagacttgtagcccgacctcaggtgacccaggtcacc
cttgatctgagggctggtaattccagagaggcccttactcagctgcttgatctagagaac
cagctaccagtcagtcaagatgcggcagagagtattatcaacactctttttgagcactac
agcaaagaggaaggagctcatgtaaggtcaaaggtcattgaattattgggtcgaattgcc
agactcccgggtgtgaacgctgtgggcatcgccaatgatctgatgacgctcttagccacc
gaaggttctcacaaggtcaaaggtcaaatatttaccacactcactgtgattggccgaagc
cttccgctcacctccgatctccaccgtcagcttctgcaacttgctcaaaaacatttaacc
gactcaaaccatgcagtacgatgtgctaccctgagcatgattggccagcttggtatgtgc
gacgtcaaatctgtggcatcatcgtcgtcatcgtcgtcatcgtcctctggaaagagtagc
aaggaacgtcgcaaaggcaatgtacaaaggatgctgggagagtttacaagcgatagggac
gcacgggtcagggaagctgctttccaagctatgttttccctacaccagcgagggcagaaa
ctagacctagacctctaccagcaatccatcaagtccttgacggatgaccatgaaggggtc
cgactggttgcactcaaactagtctgggtcctgagtcaggtctaccctgacgagcctgtt
gtggctcctggaaccacggaggagaccctgaggcttgtcgatgatggttttgccaagatc
tgtgagatggtgacggattcctcaaccaaggttcgagcggaagcagcgggtctcctgggc
tcgttgcattccgtcagtaccaggtttctggagcagactctggataagaaattaatgtca
ggactccggaaaaagaaaactgcgcatgaaagacagaaggagcagttcacatcaggggaa
tggtcgactggtaagaaatgggccgatgacaagccgcaggaggatgtggacccagaatct
gtgagtctgataacgtctggggcttgtggggccttcgtccatggtctggaagatgaatat
ttagaggtcagatccactgctttagactccctctgtgagcttgcattccagtcgccatcc
ttcgccatcctctccctcgacttcctcgtcgacatgttcaatgatgagatcgagagtgtc
cgtctgaacgccatccacagtctacgaaagatcaaccatcacatcaaattaagagaagac
cagctcgagattattttgaatgttcttgatgattcctcaaaggaagtgagggaggctctt
catgagctgctgtcatccattgccatggtaaccaagtcctgcctccacaaggctctaatg
ttcctcatcagaaatctcaacaagtatccccatgatagactctcaatatggaactgtttg
aagaaccttggtactgcccacccagacctaaccttagccttggtaccagacctccttggc
actcatccttactttgatacaccagaaccagacatggacgacccagcctacattgcagtg
atgattatgatcctcaactctgcagtcaactcccctaccatgtccgccctgtttccagag
tacaccttcagacattatacctatctgagggactccctaccgcaccttgtacctgaagta
gagaaccttcaaccagcccggagacagtgtctttctaacagaggagacaatatggctgac
aggcagaccaatcctcaagacttcttacaacagactttagataaactcaaaggtctggat
agtctgtctaactcggctgccatcaacatcatgcagctcactgttcaggatttacaacgt
atcagtgacttagaacctaagataacagctacggcccagttatattccatgtacatcgac
tgtcaactcactctagcaaaggcattgagcggtgatcattggaacgtcccagccatgctt
tgccctcaacagagcgccgagactgctcttgctgcttcagaaagggtaatagaattaagc
tacagacttcagcatctttacgttggttgcagcgagtccgagcttgccatggttcaacaa
ctccgacttcgggcctgggccctgcaacttgtggttcagctcagggggagcagcagcaac
agtggtagcagtggtagctcgtccagtcatctggcacagaagttcctgacgagagcatca
gcaatgcaagaacacttctcatcagcgaccatcacaccagattcgttcacacacgccgtc
ttcacccaggttctgaagctgtcagcggcgaggcacggcatcctcaccaaattccttcag
ccacttctccttcacaaccgagctccagtcttgagcctcgccaacacgatcagccgtgtc
tcggcggtgatccgtgagcctgcaggcgggagcgacaatcctttgcgattcaccgctgga
ctcactcttgggctgtttgtggacgcggagctggagaatgtgcgtgacctggaacgagtt
agaattcaggtgcgtttcccggactcccggacgcaactcttcatccctcgtagtagcgac
ttcagaatcctgagcaacctcagacatcgcttcatgactgaaatctacctatcgcacggt
ctgtggtcagaaccaagtcaggtcgaggtcagtattgtcatgacacatgaccttcatgga
tcgggcccttccacttcatcaaaaggggagtcaccatcgagtagcagtagagggaccgtg
gagctttgtaaacctgtgaaggtgttcttaatgcccaagccagccaagagatga
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