Lytechinus variegatus (green sea urchin): 121430504
Help
Entry
121430504 CDS
T11173
Name
(RefSeq) CAD protein-like
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00220
Arginine biosynthesis
lvg00240
Pyrimidine metabolism
lvg00250
Alanine, aspartate and glutamate metabolism
lvg01100
Metabolic pathways
lvg01240
Biosynthesis of cofactors
Module
lvg_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
121430504
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121430504
00220 Arginine biosynthesis
121430504
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121430504
Enzymes [BR:
lvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
121430504
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
121430504
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
121430504
Peptidases and inhibitors [BR:
lvg01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
121430504
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
121430504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
Peptidase_C26
GARS_A
Motif
Other DBs
NCBI-GeneID:
121430504
NCBI-ProteinID:
XP_041483720
LinkDB
All DBs
Position
17:complement(18311663..18380619)
Genome browser
AA seq
2231 aa
AA seq
DB search
MSATLCLADGTQYSGKLFGANCSVSGEVVFQTGMVGYPESLTDPSYKYQILILTYPLIGN
YGIPANDKDEFGLPLWFESEKIHVSALIVGELSEYYNHWAAAKSLSDWLKEHNIPAIQGI
DTRALTKKIREHGTMLGKVIVEGSKPESIPFEDPNLRNLIAEASTTKPMVYNKGAPCRIT
AIDCGMKYNQIRLLAQRGAQVTVVPWNHPLNIADFDGLFISNGPGDPAMAEVTINNIRSI
LNGNQIKPVFGICMGHQLTSLAVGTKAYKMKYGNRGHNQPCTHSGTGRCYITTQNHGFAI
DTSNLPDGWSVLFTNENDKTNEGIIHDTKPFYTVQFHPEHMGGPRDLEVLFDVFMDTVKD
YNAGKSEIVTVKQRIQDILNFKALPGTPTPDTQPQKVLILGSGGLSIGQAGEFDYSGSQA
IKALREEGIHTVLINPNIATVQTSKGMADKVYFLPITPEYVTQVIESERPDGILLTFGGQ
TGLNCGVKLQNNGVLQRYNVKVLGTPVKSIEDTEDRKVFADRMQGIGEKVAPSSAAYSVD
EAIEAANHIGYPVLVRAAYALGGLGSGFANNRDELLKLANAAFAHTTQVLIDKSLKGWKE
VEYEVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLTNMEYNMLRKTAIKVIRHL
GVVGECNIQYALNPESHEFFIIEVNARLSRSSALASKATGYPLAYIAAKLALGIPLPKLK
NSVTNSTTACFEPSLDYCVVKIPRWDLKKFTKVSKKIGSSMKSVGEVMAVGRKFEEAFQK
ALRMVDENVTGFDHDKKKVSDEVLKLPTDERIFVVAAALKAGYTIDKLYDLTRIDPWFLH
KFNNIVSCSTALETSPGEPSKDLMLQAKKLGFSDKQISRCILSTELAVRTLRQGYGLKPF
VKQIDTVAAEWPASTNYLYLTYNGDTHDLDFPGGHVMVIGSGVYRIGSSVEFDWCAVRCI
SEIREHGHKTIMVNYNPETVSTDYDMCDRLYFDEISFETVMDIYESEDPSGVVLSMGGQL
PNNIAMALHRQQCRILGTSPESIDNAENRFKFSRMLDQIGLNQPQWKELTNIEAAREFCE
RVGYPCLVRPSYVLSGAAMNVAHTHNDLEGFLSSAVALSKEHPVVISKFIMEAKEIDVDA
VAQDGKIVAIAISEHVENAGVHSGDATLVTPPQDLNQETIDKITAITAAIGASLEVNGPY
NLQLIAKDNQLKVIECNLRVSRSFPFVSKTLNVDLISIATKVILGQRVETIGKLEGTGRV
GVKVPQFSFSRLAGADMLLGVEMASTGEVACFGEDRFEAYMKAMLSTGFRIPKNNILLSI
GSYKGKMELLPAVRTLAAMNYNLYASVGTADFYNEHGIKIKAVEWPFEEETPEQKKANGD
APLSMLDYLSEKHFDMVINLPMRNSGARRASSFITRGYRTRRMAIDKEIPLITDIKKAKM
FIEALRRIGGAPRVKTHIDCLTSNRTIRLPGLIDVHVHLREPGATHKEDFASGTAAALAG
GITLVGAMPNTSPAITDQTSFQLVKKLAQLGARCDYAIYVGAGPDNFNEVPIIGNAAMGM
KMYLNKTFTSLRLDNVTTWIEHLQTWPRHLPLVAHAEGRTTAAILFIAQSLNRPIHIAHV
ARRDEIEVIRMAKESGMQVTCEVTPHHLFLTEEDLDVIGHERGQVKPSLVTADDQQALWD
NMDIIDCFATDHAPHTVEEKNGENPPPGFPGLETMLPLLLTAVNDGRLTIEDIILRLHTN
PRRIFSLPEQKDTYIEVDLDQVWTIPTAMAHTKSKWTPFAGRKVKGAVRRVVLRGELAYV
DGQVVVSPGFGKDVRTMPEGVPTPAPLSVQVAPAPQILGQPSSRPTSRPSSRPSSPHRLP
REGETRFQLPARVHRLSEPSETNLMSPPINPPQPTRTAFASPQQGMMSPFGLGDGPPLTP
VPVVSTGGSSLTGKHILSAAQMTKEQLHNLFNITHNMRKNLDYSILKGKVVSLMFYEGST
RTSSSFQAGAQRLGGSVIKFNESTSSHSKGETLSDTVQMMASYADVIVLRHPQPGAVEAA
SKVCRKPIINAGDGVGEHPTQALLDIFTIREEIGTVNGLTITMVGDLKHGRTVHSLARLL
TLYRVNLRYVSPDSLKMPAKVKEYVKNRGIPQEEYATIEEALPNTDVLYMTRIQRERFES
MEEYNKVSGHFILTTNTMTKAKEKMVVLHPLPRVDEISPAVDTDPRAAYFRQAEYGMYVR
MALLAMVLGKA
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaccctttgcttagcagatggcacccagtattcggggaagttatttggagct
aactgcagtgtttctggagaagttgttttccagactggtatggtcggctacccagaatcc
ttgacagatccttcttacaagtaccagatcctgatcctgacctaccctctcattggaaac
tatggcatcccggccaacgacaaggatgagtttggactcccactctggtttgagtcggag
aagattcacgtgtctgcactcatcgtcggagagctgtccgagtactacaatcattgggcg
gctgccaagtcgctcagtgattggctgaaagaacacaacattcctgccatacagggtatc
gatacaagagccctgacaaagaagatcagagaacatggcacaatgcttggaaaggtgatt
gttgaaggcagtaaaccagaaagcattccatttgaggatccaaacctacggaatcttatc
gctgaggcttctacaacaaaaccaatggtttacaacaagggtgcaccatgtcgaatcacg
gcaatcgattgtggtatgaagtacaaccagatccgtctccttgctcagcggggggcccag
gttaccgtggtgccatggaaccatcctctcaatattgcagattttgacggtctgtttatc
agcaacggtcctggtgacccggctatggctgaggtcaccatcaacaacatccgttctatc
ctgaatgggaaccagatcaaaccagtctttggtatctgtatggggcatcaactcacctct
cttgctgtcggaacgaaggcctacaagatgaagtacggaaaccgcggtcacaaccaacct
tgcacccactccggtaccggccggtgctacatcaccacccaaaaccacgggttcgccatc
gacaccagcaacctcccggacggctggtcggtcctcttcaccaacgagaacgacaagacc
aacgaggggatcatccacgataccaaaccattctacactgttcagttccacccggagcat
atgggtggtcccagggaccttgaggtgctctttgatgtcttcatggatacagtgaaggac
tacaatgcaggcaagagtgagatagtaacagtcaagcagaggatccaggacatcttgaac
ttcaaggcattaccaggaaccccaacaccggacacccaacctcagaaggtcctcatctta
gggtccggaggactttccatcggacaggctggagagtttgattactctggttcacaggcc
atcaaagcattgcgagaggaaggcatacacaccgttctcataaaccccaacatagcgacg
gtgcagacctccaagggcatggcagacaaggtctactttcttcctataacaccagaatat
gtgacacaggtcatcgaaagtgagcgaccggacggcatcctcctgacctttggaggtcag
accggtctcaactgcggggtcaaactccagaacaacggtgtcctgcagcgctacaatgtc
aaggttctgggaaccccggtcaagtccatcgaagacacagaagataggaaggtctttgct
gatcgcatgcagggcattggagagaaggtggcccctagctccgctgcgtactctgttgat
gaggctattgaagcagccaatcacatcggctatcctgtcctcgtcagagctgcctatgcc
ctgggaggactggggtctggattcgccaacaaccgtgacgagctcctcaaattggcaaac
gctgccttcgcccacacgacccaagtgctcattgataagtcgctgaagggatggaaagag
gtggagtacgaggtcgtacgagacgcttacgacaattgcatcaccgtttgcaacatggag
aacattgaccctcttggaatccatacgggtgaatctatcgtggtagcacctagtcagacc
ctaactaacatggagtataacatgctgaggaagacagctataaaggtcatcagacatctg
ggggtcgtaggagagtgcaatatacagtacgccctcaacccagagtcgcacgagtttttc
atcatcgaggtgaatgccagactttcccgtagctctgccctggccagtaaggccactggc
taccctctagcttacatcgctgccaagcttgccctggggatcccccttcccaagttgaag
aactcggtcaccaactccaccacggcttgctttgaacccagtctggactactgtgtggtg
aagatacctcggtgggacctcaagaagttcaccaaagtcagcaagaagattggtagttcg
atgaagagtgtcggagaggtgatggctgttggaagaaagtttgaagaggcattccagaaa
gcccttcgcatggtggatgagaacgtgacaggatttgatcatgacaagaagaaggtctcg
gatgaggtcctgaaactgccgaccgatgagcgcatcttcgtggtagcagctgcgctcaag
gcaggctacaccatcgacaagctctacgacctgacccgcatcgacccgtggttcctccac
aagttcaacaacatcgtcagctgctccacagccctggagacctctcccggagaaccttct
aaggatctgatgctccaggccaagaagttggggttctccgataagcagatctccagatgc
attttgagcaccgagctagcagtccgcacccttcgacagggctatggtctaaaaccgttc
gtgaaacagatcgacacagtcgctgcagagtggccagccagcaccaactacctctatctg
acctacaacggtgacacccacgaccttgatttccccggaggtcatgtgatggtgatcggt
tcaggggtgtatcgtattgggagcagcgtggagtttgattggtgcgctgttcgctgcatc
agtgaaataagagaacacggacataagaccatcatggtcaactacaacccggagacggtg
agcacggactacgacatgtgcgatcgtctgtactttgatgagatctccttcgagacggtg
atggatatctatgagagcgaggatcccagcggtgttgtgctctccatgggagggcagcta
cctaacaacatcgccatggctctgcacagacaacagtgccgtattctgggtacttccccc
gagtcaatcgacaacgctgagaatcgtttcaagttctctcgtatgctggaccagattggg
ctcaaccagccccagtggaaggaactcaccaatattgaggccgccagagagttctgtgag
agggttggctatccatgtttggtgcgtccgtcatacgtattgagcggtgctgcgatgaat
gttgcccatactcacaatgatctagagggctttctcagcagtgccgtcgcactcagcaag
gagcatcccgtcgtcatctcaaagttcatcatggaagccaaggaaattgatgtggacgca
gtagcccaggacgggaaaattgttgccatagcgatctcggaacacgtagagaacgccggc
gtgcactcgggagatgcaactcttgttaccccaccccaagatctgaaccaggagacgatt
gataagataactgccatcaccgcagccatcggagcaagtctagaagtcaatggtccctac
aacctacagctcattgcaaaggacaatcaactcaaggtgatcgagtgtaatctcagggtc
tcccgctccttcccctttgtctccaagacattgaatgttgacctgatttccattgcgacc
aaggtcatccttgggcagcgggtggaaaccatcggcaagctggaaggcacaggccgggtg
ggagtcaaggtgccacagttttccttctcccgtctggctggtgccgacatgcttctaggt
gtggagatggccagtactggggaggtggcctgcttcggtgaagaccgctttgaggcttac
atgaaggcaatgctgagcactggattccgtatcccaaagaacaatatccttctctctatt
ggtagctacaaggggaaaatggaacttcttcctgccgtgagaaccctcgcagcgatgaac
tacaacctttatgccagcgtgggtacagcagacttttacaatgaacatggcatcaagatc
aaagctgttgagtggccattcgaagaggagactcccgagcagaagaaagccaacggcgac
gccccactcagcatgctggactatctctccgagaagcactttgacatggtcatcaacctg
ccaatgaggaacagcggagctcgtagagcctcttccttcatcacgaggggttaccggaca
cgacgcatggccatcgacaaagagatcccacttattaccgacatcaagaaagccaagatg
ttcatcgaggctttgcgacgcattggaggggccccacgggttaagactcacatcgactgt
ctcacgtccaaccgaactatccgtcttcccggcctcattgacgtccatgtccacctccgc
gaacctggggcaacgcacaaggaagactttgcctctggaacggcagcggctctggcggga
ggaatcacgctggtcggtgccatgcctaatacgtcgccagcaattacggatcagacatcg
ttccagcttgtcaagaagcttgctcaactgggagcgcgttgtgattatgccatctatgtc
ggtgcaggaccagataatttcaatgaggttccgatcatcggtaacgccgccatggggatg
aagatgtaccttaataagacgttcacttcactcagattggacaatgtaacaacttggatc
gagcatctacaaacctggccccgtcacctgccattggttgcccacgccgagggacgcacc
actgctgccatcctcttcattgctcaatctctcaatagacccattcacatcgctcatgtt
gctaggagagatgagatcgaggtgattagaatggctaaggaatccggcatgcaggtcacc
tgtgaggtcactccgcatcatctcttcctgaccgaggaagaccttgatgtcataggtcat
gagagaggtcaggtcaagcccagtctggtcactgccgatgaccagcaggctctgtgggat
aatatggacatcattgattgcttcgctactgaccacgccccccatacagtagaagagaag
aacggcgagaacccgcccccaggcttccctggtcttgagactatgctcccgctcttgcta
acggctgtcaatgatggcaggctaactatcgaggatataatcctccgtctccataccaac
cctcggaggatcttcagcttgccggagcagaaggacacctacatcgaggtagacctggac
caggtctggaccatacccactgccatggcccacaccaagagcaagtggaccccgtttgct
ggtcgaaaggtcaaaggagccgtgcgtagggtcgtgctgcgaggagagctggcgtatgtg
gatgggcaggtggttgtatcaccgggattcggcaaggacgtccgcaccatgccggagggt
gtacccacccctgcccccctctcagtccaggtggcacctgccccacagatactgggacag
ccatcctcccgtcccacttcacgcccctcatcgcgcccctcctcgccgcacaggctgccc
agagagggcgagacacgcttccagctacctgcgagggttcatcgactatcagaaccgagt
gaaaccaacttgatgtcgcccccaatcaaccctcctcagccaaccaggacggccttcgcc
tcaccacagcagggtatgatgtcccccttcggtcttggggatggaccccctcttacccct
gtaccggtggtatctaccggtggatcctcgttaactggtaaacacatcttgagtgcagct
caaatgaccaaagaacagcttcacaacctgttcaacatcactcacaacatgaggaagaac
ttggattattccattcttaagggtaaggttgtgagcctgatgttctacgagggaagcaca
aggacttcatcatcattccaggccggagcacagcgtcttggaggcagtgtcatcaagttt
aatgagagcacctcatctcattctaaaggagagacactatcagataccgtacagatgatg
gcaagctatgctgatgtaatagtccttcgccatcctcagcctggggcggtggaagcagcc
tctaaggtctgtcgcaaaccaatcatcaacgctggtgacggagtcggggagcatccaacc
caagctctgctggatatcttcacaatccgtgaggagatcggtacagtcaacgggttaacg
atcacaatggttggtgacctgaagcacggtcgcactgtccattccctggccagactactg
accctctatcgggtcaatctgcgctacgtctcaccggatagtctcaagatgccggccaag
gtcaaggaatatgtcaagaacagaggcattccacaggaagaatatgccaccattgaagag
gccttgcccaacacagacgtcctttacatgacacgaatccaaagagagagatttgagagt
atggaagaatacaataaggtatccggtcacttcatcttgaccactaacacaatgaccaag
gccaaggaaaagatggttgtgcttcacccacttcctagggttgatgaaatcagccctgct
gtcgatactgacccaagagcagcctacttcaggcaagcagaatacggcatgtacgtcagg
atggctctcttggctatggtacttggcaaggcatag
DBGET
integrated database retrieval system
