Limimaricola variabilis: T8T21_09475
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Entry
T8T21_09475 CDS
T09625
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00020
Citrate cycle (TCA cycle)
lvr00785
Lipoic acid metabolism
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
lvr01120
Microbial metabolism in diverse environments
lvr01200
Carbon metabolism
lvr01210
2-Oxocarboxylic acid metabolism
Module
lvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T8T21_09475
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
T8T21_09475
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
T8T21_09475
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
DUF4784_N
Motif
Other DBs
NCBI-ProteinID:
WPY93355
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All DBs
Position
1906693..1909656
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AA seq
987 aa
AA seq
DB search
MTEQSPNDVFHASSFLQGANADYIEHLHARYAENPSSVDAAWQEFFRSLGDSGSDARAEA
AGPSWARRDWPMQPNDDLTAALDGQWPAAAEAKGARDKIAAKAAEKGVGLSEEQLRAAVL
DSIRALMIIRAYRIRGHLAADLDPLGLREQTPHPELDPANYGFTKSDMDRPIFIDNVLGL
EIATMNEILALVKRTYCGTFALQYMHISDPEQSAWLKERIEGYGKEIQFTKEGRKAILNK
LVEAEGFEKFLHVKYMGTKRFGLDGGEALIPAMEQIIKRGGQLGVKDIVIGMPHRGRLSV
LANVMQKPYRAIFHEFQGGSFKPEEVDGSGDVKYHLGASSDREFDGNKVHLSLTANPSHL
EAVNPVVLGKARAKQSQLGDQDRTQVIPVLLHGDAAFAGQGVVAEGFGLSGLVGHRTGGT
IHIVVNNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKF
HKDVVIDIFCYRRFGHNEGDEPMFTNPVMYKKIKSQKTTLTLYTERLVKDGLIPEGEIED
MKAQFQALLGEEFEAGKSYRPNKADWLDGRWSHLDRRDHESYQRGQTAIDEKTMTEIGRA
LTRAPEGFPLHRTVSRLLEAKGQMFESGKGFDWATAEALAFGSLLTEGYPVRLSGQDSTR
GTFSQRHSAFINQENEERYYPLNNIRDGQARYEVIDSMLSEYAVLGFEYGYSLAEPNALV
MWEAQFGDFANGAQIMFDQFISSGESKWLRMSGLVMLLPHGYEGQGPEHSSARLERFLQM
CGGDNWIVANCSTPANYFHILRRQLHRTFRKPLVLMTPKSLLRHKMAVSDAEDFVTGSSF
HRVLWDDAEKGHSDTQLKPDSEIKRVVMCSGKVYYDLLEERDARGLDDVYLMRIEQFYPF
PALSLVKELERFKGAEMIWCQEEPKNQGAWSFIEPNIEWVLSRIDAAHKRPRYVGRHASA
SPATGLASQHKAQQEALVNEALSIEGN
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcaaagccccaacgacgtgttccacgcctcctccttcctgcagggtgcgaac
gccgactacatcgagcatctgcacgcgcgctatgccgagaacccgtcgagcgtcgacgcg
gcctggcaggagttcttccgcagcctgggcgacagcggctcggacgcccgcgccgaggcc
gccggcccctcctgggcccgccgcgactggccgatgcagccgaatgacgacctgactgcc
gcgctcgacgggcagtggcccgccgctgccgaagccaagggcgcccgcgacaagatcgcc
gccaaggccgccgagaagggcgtcgggctctccgaggagcagctgcgcgccgcggtgctc
gacagcatccgcgcgctgatgatcatccgcgcctaccggatccgcggccatctcgccgcc
gacctcgatccgctgggcttgcgcgaacagacgccgcatcccgagctggatccggccaat
tacggcttcaccaagtccgacatggaccggccgatcttcatcgacaacgtgctcggcctc
gagatcgcgacgatgaacgagatcctggcgctggtgaagcggacctattgcggcaccttc
gcgctgcaatacatgcacatctccgaccccgagcagtcggcctggctcaaggagcggatc
gagggctacggcaaggagatccagttcaccaaggaaggccgcaaggcgatcctcaacaag
ctggtcgaggccgagggcttcgagaagttcctgcacgtcaagtacatgggcaccaagcgc
ttcggcctcgacggcggcgaggcgctgatcccggcgatggagcagatcatcaagcgcggc
ggccagctcggcgtgaaggacatcgtgatcggcatgccgcatcgcggccgcctctcggtg
ctcgccaacgtcatgcagaagccctaccgggcgatcttccacgagttccagggcggcagc
ttcaagcccgaggaagtggacggctccggcgacgtgaaataccacctcggcgcttcttcg
gaccgcgagttcgacggcaacaaggtccacctgtcgctgaccgccaaccccagccacctc
gaggcggtgaacccggtcgtgctcggcaaggcgcgcgccaagcagagccagctcggtgac
caggaccgcacccaggtgatcccggtgctgctgcatggcgacgcggccttcgccggccag
ggcgtcgtggccgagggcttcggcctgtcgggcctcgtcggtcaccgcaccggcggcacg
atccacatcgtggtgaacaaccagatcggcttcaccaccgcgccgcacttctcgcgttcg
tccccctacccgaccgacatcgcgctgatggtcgaggcgccgatcttccacgtcaacggc
gacgatccggaggcggtggtgcacgctgccaaggtggcgaccgagttccggcagaagttc
cacaaggacgtcgtcatcgacatcttctgctaccgccgcttcggtcacaacgagggcgac
gagcccatgttcaccaacccggtgatgtacaagaagatcaagagccagaagaccacgctc
acgctctacaccgagcggctcgtcaaggacgggctgatccccgagggcgagatcgaggac
atgaaggcgcagttccaggcgctgctgggtgaggagttcgaagccggcaagtcctaccgc
ccgaacaaggccgactggctcgacgggcgctggagccatctcgaccggcgcgaccacgag
agctaccagcgcggccagaccgcgatcgacgagaagaccatgaccgagatcggtcgcgcc
ctcacccgcgcgcccgagggtttcccgctgcaccgcaccgtctcgcgcctgctcgaggcg
aagggccagatgttcgagagcggcaagggcttcgactgggccaccgccgaggcgctggcc
ttcggctcgctgctgaccgaaggctacccggtccggctctcgggccaggacagcacgcgc
ggcaccttcagccaacgccactcggccttcatcaaccaggagaacgaggagcgctactac
ccgctcaacaacatccgcgacggccaggcccgctacgaggtcatcgactcgatgctctcg
gaatacgcggtgctgggcttcgagtacggctactcgctcgccgagcccaacgcgctggtg
atgtgggaggcgcagttcggcgacttcgccaacggcgcgcagatcatgttcgaccagttc
atctcctcgggcgagtcgaagtggctgcgcatgtcgggcctcgtgatgctgctgccgcat
ggctatgagggccagggccccgagcactcctcggcacggctcgagcgcttcctgcagatg
tgcggtggcgacaactggatcgtggcgaactgctcgaccccggcgaactacttccacatc
ctgcgccggcagctgcaccgcaccttccgcaagccgctggtgctgatgacgccgaaatcg
ctgctgcgtcacaagatggcggtctcggatgccgaggacttcgtcaccggctcgtccttc
caccgggtgctgtgggacgacgccgagaagggtcattcggacacgcagcttaaacccgac
tccgagatcaagcgcgtggtgatgtgctcgggcaaggtctattacgacctgctcgaggag
cgcgacgcgcgcgggctcgacgacgtctacctgatgcggatcgagcagttctatcccttc
ccggcgctgtcgctggtcaaggagctggagcgcttcaagggcgccgagatgatctggtgc
caggaagagcccaagaaccagggggcctggagcttcatcgagcccaacatcgaatgggtg
ctgagccggatcgacgccgcgcataagcgcccccgttacgtcggccgtcacgcgagcgcc
tcgcccgcgaccggcctcgccagccagcacaaggcccaacaggaagcgctggtgaacgaa
gcgctgagcatcgaaggaaactga
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