Leptonychotes weddellii (Weddell seal): 102734872
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Entry
102734872 CDS
T08708
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102734872 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lww03041
]
102734872 (EFTUD2)
Spliceosome [BR:
lww03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102734872 (EFTUD2)
Complex C
U5 SnRNP specific factors
102734872 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
102734872
NCBI-ProteinID:
XP_030886631
UniProt:
A0A7F8R0G8
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEYANLHITTFFPPLLEPIIKPVKTKK
FTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRY
DQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGYVSSHLIPNCVVLS
CAAHMDDDDDDDDVGDHDEDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTA
LGDLAPSIIRVFIRVSVLPDALFKVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLP
PTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADT
FGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDT
SLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIE
HTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVL
GENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRG
NEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVIL
GTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAE
PLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTL
PSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIP
TARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYT
IKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLA
REFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagtatgccaacctgcac
atcactactttttttccccccctgctagaacctattattaagccagtgaaaaccaagaaa
ttcactctgatggagcagacattacctgtcacggtgtatgaaatggatttcttggcagat
ctgatggataactcggaactcatcagaaatgtgaccctctgtggccatctccaccatggc
aagacatgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgctat
gaccaagatctgtgctatactgacattctcttcacagagcaagagagaggtgttggcatc
aaaagcactcctgtgacagtggtcttgccagataccaaaggaaaatcttacctcttcaat
atcatggacactccaggctacgtttcctctcatctaattccaaactgtgttgtgctctcg
tgcgctgcccacatggacgatgacgatgacgacgatgatgtaggagaccatgatgaggac
caccctgggatggaggtcgtgctgcacgaggacaagaagtactaccccacagctgaggag
gtgtatggccctgaggtggagaccatcgttcaggaagaagacacccagcctctcaccgca
ctgggagacctggctcccagcatcatccgtgtgtttatccgtgtctcagtcctgccagat
gccctcttcaaggtgatgctgaacaccgagcgactgatcaagcacgcagtgcaggagagg
ctggcggtcaccgtgtgcatcaacaagattgaccggctgatcctggagctcaaactgcct
cccaccgatgcttattacaagctgcggcacatcgtagatgaggtcaatgggctcataagc
atgtattccacggatgagaacctgatcctttccccgctcctgggcaacgtctgcttctcc
agctcccagtacagcatctgcttcacgctgggctcctttgccaagatctatgctgacacc
tttggtgacattaactaccaggaatttgctaaaagactctggggtgacatttatttcaac
cccaaaacacgaaagttcaccaaaaaggccccaaccagcagctcccagaggagctttgtg
gagtttatcttggagcccctttataagatccttgctcaggttgtgggtgacgtggacacc
agcctccccaggactctggacgagcttggcattcacctgaccaaggaagagctgaagctg
aacatccgccccctgctcaggctggtctgcaaaaaattctttggcgagttcacaggcttt
gtggacatgtgtgtgcagcacatcccctctccaaaggtgggcgccaagcccaagatagag
cacacctacaccggtggtgtggattctgatctcggcgaggccatgagcgactgtgacccc
gacggtcccctgatgtgccacactaccaagatgtacagcacagatgatggagttcagttt
catgccttcggccgggtgctaagtggcaccatccacgctgggcagcctgtgaaggtattg
ggggagaactacaccctggaggatgaggaagactcccagatatgcaccgtgggccgcctc
tggatctctgtggccaggtaccatattgaggtgaatcgtgttcctgctggcaactgggtt
ctgattgaaggtgttgatcaaccaattgtgaagacagcgaccataactgaaccccggggc
aatgaggaggctcagattttccggcccttgaagttcaacaccacatctgttatcaagatt
gctgtggaaccggtcaacccctcagagctgcccaagatgctggacggtcttcgcaaggtc
aacaagagctatccatccctcaccaccaaggtggaagagtctggggagcacgtgattctg
ggtactggggagctctacttggactgtgtgatgcacgacttgcggaagatgtactcagag
atcgacatcaaggtggctgaccctgttgtcacgttttgtgagacggtggtggaaacatct
tccctcaagtgctttgctgaaacgcccaataagaagaacaagatcaccatgattgccgag
cctcttgagaagggcctcgccgaggacatagagaacgaggtggtccagatcacttggaac
aggaagaaactgggagaattctttcagaccaagtacgattgggatctgctggctgcacgt
tccatctgggctttcggccctgatgccaccggccccaacatcctggtggatgataccctg
ccctctgaggtagacaaggctcttcttggttcagtgaaggacagcatcgttcaaggtttc
cagtggggaacccgggaggggcccctctgtgatgagctgattcgaaatgtcaagtttaag
atcctcgatgcagtggttgcccaagagcccctgcaccggggtgggggccagatcatcccc
acggcaaggagagtcgtctattctgccttcctcatggccactcctcgcctgatggagcct
tactactttgtggaggtccaggcccctgcggattgtgtctctgctgtgtacactgtcctg
gccaggcgcagggggcacgtgactcaggatgcacccatcccaggctcccctctctacacc
atcaaagctttcatccctgccattgattcttttggctttgagactgatctgcggactcac
acccaagggcaggccttttccttgtctgtcttccaccattggcagattgtacctggcgat
cctctggacaagagcattgtcatccgccccctggagccacagcctgctcctcacctggcc
cgggaattcatgatcaaaacccgtcgcaggaagggcctgagtgaggatgtaagcatcagc
aagttcttcgatgatcccatgttgctggaactcgccaagcaggatgttgtgctcaattac
cccatgtga
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