Leptonychotes weddellii (Weddell seal): 102744643
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Entry
102744643 CDS
T08708
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04360
Axon guidance
lww05017
Spinocerebellar ataxia
lww05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102744643
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102744643
05022 Pathways of neurodegeneration - multiple diseases
102744643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lww04040
]
102744643
Ion channels [BR:
lww04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102744643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
102744643
NCBI-ProteinID:
XP_006738240
UniProt:
A0A2U3Y3E8
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEEEGEDEGSELQRRRRGWRGVNGGLEQRLAPSQREPHD
YCPPPFSPGLDMSMEESPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAA
EYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALL
LAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILA
AHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLASPAYL
SLSSEDPVLTALELSNELAKLANIEKEFKRILNIAQANRNCQEINYCGDPDLSPDLMTDW
ILAGWHIHFLQGGEQLRQNNLGVILIALAHIDGVITLFASLLHELSSWLILHFNKGFDFF
NNAHLLLSAKEIVIQSKEQFLKLFFLEPKCSKT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggaagaggagggcgaggacgaaggctcggagctgcagcgccgccggcggggctgg
aggggcgtcaacggggggctcgagcagcgcttggcgccctcacagcgggaaccgcacgac
tactgcccgccgcccttctcccccgggctggacatgtccatggaggaaagtccatctctg
aggcgcaagacggtgatgcgggagaagggccggcgccaggccgtccggggcccggctttc
atgttcaatgaccggggcactagcctcactgccgaggaggagcgcttcctcgacgctgcg
gagtatggcaacatccctgtggtgcgcaagatgctggaggagtccaagacgctgaacgtc
aactgtgtggactacatgggccagaacgcgctgcagctggccgtgggcaacgagcacctg
gaggtgacagagctgttgcttaagaaggagaacctggcgcggatcggcgacgccctgctc
cttgccatcagcaagggctacgtgcgcatcgtggaagccatcctcaaccaccccggcttc
gcggccagcaagcgcctgaccctgagcccctgtgagcaggagctgcaggacgacgacttc
tacgcctacgacgaggacggcacgcgcttctcgcccgacatcacgcccatcatcctggcg
gcgcactgccagaagtacgaggtggtacacatgctgctgatgaagggcgccaggatcgag
cggccacacgactatttctgcaagtgcggggactgcatggagaagcagaggcacgactct
ttcagccactcacgctcgaggatcaatgcctacaaggggctggccagcccggcgtacctg
tccttgtctagcgaggacccggtgctcaccgccctggagctcagcaacgagctggccaag
ctggccaacatagagaaggagttcaagaggattctgaatatagcacaggctaacagaaac
tgtcaggaaattaattactgtggagacccagatctctctccagacttaatgacagactgg
atcctggccggttggcacattcactttcttcaggggggtgaacagcttcgtcaaaacaac
ttgggtgttattctcattgctttggctcacattgatggtgttattactctgtttgccagc
ttgctacatgaattgagcagttggctaattcttcatttcaataaaggatttgacttcttt
aataatgctcatttgttgctgagtgctaaagagattgtgattcaatccaaagagcagttt
ttgaagctgttctttctagaacccaagtgttccaaaacataa
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