Leptonychotes weddellii (Weddell seal): 102746018
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Entry
102746018 CDS
T08708
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww00900
Terpenoid backbone biosynthesis
lww01100
Metabolic pathways
Module
lww_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102746018 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lww01006
]
102746018 (GGPS1)
Enzymes [BR:
lww01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
102746018 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
102746018 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
102746018 (GGPS1)
Prenyltransferases [BR:
lww01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
102746018 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
EBA-175_VI
Motif
Other DBs
NCBI-GeneID:
102746018
NCBI-ProteinID:
XP_006746203
UniProt:
A0A2U3YRI8
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKKYCVHYLENVGSFEYTRSTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEEDE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaacagtccaaagaattcttctagaaccctataaatatttactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcatttaatcattggctaaaa
gttccagaagacaagctacagattatcattgaagtgacagaaatgttgcataatgccagt
ttgctcatcgatgatattgaagacaactcaaaactccgacgtggctttccagtggcacac
agcatctatggaattccatctgtcatcaattctgccaattatgtatattttcttggccta
gagaaagtcttaacccttgatcacccagatgcagtgaagctttttacccaccagcttttg
gaactccatcagggacaaggtctagatatttattggagggataattacacttgtcccact
gaagaagaatataaagcgatggtgctgcaaaagacaggtggactatttggattagcagta
ggtctcatgcagttgttctctgattacaaagaagatctaaagccactacttaatacactt
gggctctttttccaaattagagatgattatgctaatctacactccaaagaatacagtgaa
aacaaaagcttttgtgaagatctaacagagggaaagttttcattccctaccattcacgct
atttggtcaaggcctgaaagtacccaggtgcagaatatattgcgccagagaaccgaaaac
gtagatattaaaaaatactgtgtacattatcttgagaatgtaggttcttttgaatacact
cggagtactcttaaagagcttgaatcgaaagcctataaacaaattgatgcgcgtggtggg
aaccctgagcttgtagctctaataaagcacttaagcaaaatgttcaaagaagaggatgaa
taa
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