Leptonychotes weddellii (Weddell seal): 102746318
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Entry
102746318 CDS
T08708
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04064
NF-kappa B signaling pathway
lww04622
RIG-I-like receptor signaling pathway
lww04623
Cytosolic DNA-sensing pathway
lww05160
Hepatitis C
lww05161
Hepatitis B
lww05162
Measles
lww05164
Influenza A
lww05168
Herpes simplex virus 1 infection
lww05169
Epstein-Barr virus infection
lww05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102746318 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102746318 (DDX58)
04623 Cytosolic DNA-sensing pathway
102746318 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
102746318 (DDX58)
05160 Hepatitis C
102746318 (DDX58)
05171 Coronavirus disease - COVID-19
102746318 (DDX58)
05164 Influenza A
102746318 (DDX58)
05162 Measles
102746318 (DDX58)
05168 Herpes simplex virus 1 infection
102746318 (DDX58)
05169 Epstein-Barr virus infection
102746318 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lww04054
]
102746318 (DDX58)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102746318 (DDX58)
Pattern recognition receptors [BR:
lww04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102746318 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
PNMA
CorA
Motif
Other DBs
NCBI-GeneID:
102746318
NCBI-ProteinID:
XP_030883144
UniProt:
A0A7F8QPN5
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MDAAEFLNGKAQNTASPTCTPLKPRNYQLELALPAKEGKNTIICAPTGCGKTFISLLICE
HHLKKFPQGQKGKVVFFAIQLPVYEQQKSVFSKYFEKLGYKVAGVSGATSENILMEQIVE
NNDIIILTPQILVNNLRNGTIPSLSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGDSS
DPLPQVIGLTASVGIGDAKNTMEAMEYICKLCASLDTSVIATVKDNLEELEEIVYKPQKF
FRKVESRTTDRFKCIISQLMRETESLAKNIFDELGTVTLESVSQIQNRNFGTQKYEQWIV
SVQKACMVFQLPDKDEESRICKALYLYTSHLRKYNDALIINEHARMKDALDYLKDFFTDV
RAAGFDEIEQHLTQRFEEKLKELESVSMDPSNENPKLQDLSFILQEEYHLNPESRTILFV
KTRALVDALKKWIEENSELSFLKPGILTGRGKTNHNTGMTLPAQKCALDAFRTDGDKKIL
IATSVADEGIDIAQCNLVILYEYVGNVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKIN
IYKENMMNDSILRLQTWDKAVFKEKVLQIQIQEKLIRDSQGKVEPVPDKENKKLLCRKCK
GFACYTADIRVVEDCHYAVVGDAFKKCYVSKLHPKPKTFGHFEKRAKIFCARQNCSHDWG
IHVKYKTFEIPVIKIESFVVEDITTGDQKLYAKWKDFPFEKRSFDATEMSE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcagagttcctgaatggcaaagcacagaacacagcctctcctacttgcacc
ccactgaagccaagaaattaccaactagagctcgctttgcctgctaaggaaggaaaaaac
acaataatatgtgctcctactggttgtggaaaaacgtttatttcccttcttatatgtgaa
catcatcttaaaaaatttccacaaggacaaaaggggaaggttgtcttttttgctattcaa
ctcccagtgtatgaacagcagaaatccgtgttctccaaatattttgaaaaacttgggtac
aaagttgcaggtgtttctggagcaacatctgagaatatcttaatggaacagattgttgag
aacaatgacatcatcattttaactccacagattcttgtgaataaccttagaaatgggact
attccatcactctctgtctttactttgatgatatttgatgaatgtcacaacactggtaaa
caccatccttacaatatgatcatgtttaattatctagatcagaaacttggagattcttca
gacccactgcctcaggtcattgggctgactgcctcggttggcattggggatgccaaaaac
acaatggaagccatggaatatatctgcaaactgtgtgcttctcttgacacatcagtgata
gcaacagtcaaagacaacttggaggaattggaagaaattgtctataagccccagaagttt
ttcaggaaagtggaatcacggactactgacagatttaaatgcatcatatcacagctgatg
agggagacagagagtctggcaaagaatatctttgacgaactcggtaccgtaactctcgaa
agtgtatctcaaattcaaaataggaattttggaacacagaaatatgaacaatggatcgtt
tctgttcagaaggcatgcatggtgtttcagttgcccgacaaagatgaagagagcaggatt
tgtaaagccctgtacttgtacacttcccacttgcggaaatataatgatgccctcattatc
aatgagcatgcacggatgaaagatgctctggattacttgaaagacttcttcactgatgtc
cgagctgcaggatttgatgagattgagcagcatctcactcagagattcgaagaaaagctg
aaggaactggaaagtgtttccatggatcccagcaatgagaaccctaaactccaagatctc
tccttcatcttgcaagaggagtatcacttaaatccagagagtagaaccatcctctttgtg
aaaaccagagcacttgtggatgctttgaagaaatggattgaagaaaattctgaactcagc
tttctaaaacctggcatattgactggacgtggcaaaacaaatcacaacacaggaatgacg
ctcccagcacagaagtgtgcattggatgcattcagaaccgatggagataaaaagattctg
attgctacctcagttgctgatgaaggcattgacattgctcagtgtaatttggtcatcctg
tatgagtatgtgggcaatgtcatcagaatgatccaaaccagaggcagaggaagagcaaga
ggtagcaagtgcttccttctgaccagcaatgctgatgtaattgaaaaagaaaaaataaat
atatacaaagaaaacatgatgaatgactccattttaaggcttcagacgtgggataaagca
gtatttaaagaaaaggttctccagatacagattcaagaaaaattaatcagggatagtcaa
ggaaaagtagaacctgtacctgataaggaaaataaaaagctgctctgccggaagtgcaag
ggctttgcatgttatacagctgacatcagagtggtggaggactgccattacgctgtggtt
ggagatgctttcaagaagtgctatgtgagtaaattacaccccaaaccaaagacctttggg
cattttgagaagagagcaaagatcttctgtgccagacagaactgtagccatgactgggga
atccatgtgaagtataagacatttgagatcccagttataaaaatagaaagctttgtggtg
gaggatattacaactggagatcagaaactatatgccaagtggaaggattttccttttgag
aagagatcctttgatgctacagaaatgtccgaatga
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