Lacrimispora xylanolytica: OW255_18530
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Entry
OW255_18530 CDS
T08662
Name
(GenBank) response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa01502
Vancomycin resistance
lxa02020
Two-component system
Module
lxa_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OW255_18530
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OW255_18530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lxa02022
]
OW255_18530
01504 Antimicrobial resistance genes [BR:
lxa01504
]
OW255_18530
Two-component system [BR:
lxa02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
OW255_18530
Antimicrobial resistance genes [BR:
lxa01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
OW255_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
OKR_DC_1_N
MTD
Motif
Other DBs
NCBI-ProteinID:
WAJ23533
LinkDB
All DBs
Position
complement(3990151..3990858)
Genome browser
AA seq
235 aa
AA seq
DB search
MSETISILVVDDEKEIADLVEIYLVSDGYKVYKANHAEEGLEILEKHQIHLVLLDIMMPG
MDGLSMCRKIRETNNIPIIMLSAKSTDLDKILGLGTGADDYVTKPFNPLELTARVKSQLR
RYTQLNPNSSVNEAAKNEIAIRGLTINKDNHKVTVYGEEIKLTPIEFDILYLLASNPGRV
FSTDEIFEKVWNEKVYEANNTVMVHIRRLRGKMKEDTRQNKIITTVWGVGYKIEK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacaataagcatactggttgtggatgatgagaaggagattgcagatctggtt
gaaatctatctggttagcgatggatataaagtatataaggcaaaccacgcagaggagggc
cttgagatactggaaaagcatcagattcatctggttcttttagacatcatgatgcctgga
atggatggactttccatgtgcaggaagatacgagagacaaataatatccccattatcatg
ctaagtgcaaaatccactgatttagataagatacttggccttggtaccggggcagatgat
tacgtaacaaagccgtttaaccctctggagcttacggcgcgtgtaaaatcacagcttcgc
cgctatacccagttaaaccccaacagctcagtcaatgaagcagccaagaacgaaattgct
attcgggggctgaccattaataaggataatcacaaggtaaccgtttacggagaagaaatt
aaactgactcccatagaatttgacattctatatttgctggcttccaatccaggcagggtg
ttcagcaccgatgagatctttgaaaaggtttggaacgaaaaggtttatgaagccaataac
accgtaatggtacatatcagacgtctgcgcggcaagatgaaggaagacaccagacagaat
aagatcatcaccactgtttggggggtaggttacaaaattgaaaagtga
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