Lysobacter yananisis: RDV84_07405
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Entry
RDV84_07405 CDS
T09342
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18300
outer membrane protein, multidrug efflux system
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_07405
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_07405
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_07405
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
RDV84_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DIM
Motif
Other DBs
NCBI-ProteinID:
WMT04652
UniProt:
A0ABY9PC84
LinkDB
All DBs
Position
1743225..1744676
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AA seq
483 aa
AA seq
DB search
MRNLKLPAVALLTLALAACAVGPDYVRPTLATPEKFARGDAEAATDGTAAPDPAAEFWRN
FNDPTLTRLVEESLGANHDLRIALANYDRANALLRGAKFDRFPTITGSASGSDTRSSSDQ
MPGVDNRGRDNESYSAQANVSWELDVFGRVRRNVESQRADTWASAADLQAMQVAIVGEVA
RSYVELRGLQERLRVARENAENQQETLRLVQARFDAGRGTEFDTARARAQLEATLARVPN
LEAQVAVTQHRLAVLTGQTPDSLVAELDQAAPLPALPARLDAGTPGELLRRRPDVAAAEH
RLHAATARIGVATADLFPRFTLSGLIGSQAIDTSALFERASETRLVALGIDWSFLDIGRV
RSRIKAADASAEGELARYQQSVLLALEDTENALVRYARARVEDQHLERAAQDSLKAAKLA
RVRYEAGAADLFEVLDAERTQLQAQDAFADGRTRSVTGAIALYKAMAGGWPAREPVREGM
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NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatctcaagctccccgcggtcgcgttgctgacgctcgcgctcgccgcctgcgcg
gtcggtccggactatgtccggccgaccctggccacgccggagaagttcgcccgcggcgac
gccgaagcggccaccgacggcaccgccgcgccggatccggcggccgagttctggcgcaac
ttcaacgacccgacgctgacgcgtctggtcgaggagtcgctcggcgccaaccacgacctg
cgcatcgccctggccaactacgaccgcgccaacgcgctgttgcgcggcgccaagttcgac
cgcttcccgaccatcaccggcagcgccagcggcagcgacacgcgctccagcagcgaccag
atgccgggcgtggacaaccgcggccgcgacaacgagagctacagcgcccaggccaacgtg
agctgggagctggacgtgttcggccgggtgcgccgcaacgtcgagtcgcagcgcgccgac
acctgggccagcgcggccgacctgcaggcgatgcaggtggccatcgtcggcgaagtcgcg
cgcagctacgtcgagctgcgcggcctgcaggaacgcctgcgggtcgcgcgcgagaacgcc
gagaaccagcaggagacgctgcgtctggtgcaggcgcgcttcgacgccggccgcggcact
gagttcgacacggcgcgcgcgcgcgcgcagctcgaagcgaccctggcgcgggtgccgaac
ctggaagcgcaggtcgcggtgacccagcaccggctcgcggtgctgaccgggcagacgccc
gattcgctggtcgccgaactcgaccaggccgcgccgctgccggccttgccggcgcggctc
gacgccggcaccccgggcgaactgctgcgccgccgtcccgacgtcgccgccgccgagcac
cgcctgcacgcggccaccgcgcggataggggtcgctaccgccgacctgttcccgcgcttc
accctgtcgggcctgatcggttcgcaggccatcgacaccagcgcgctgttcgaacgcgcc
agcgaaacccgcctggtcgcgctcggcatcgactggtcgttcctcgacatcggccgcgtg
cgctcgcgcatcaaggccgccgacgccagcgccgaaggcgaactggcgcgttaccagcaa
agcgtgctgctggcgctggaagacaccgagaacgcgctggtgcgttatgcccgcgcgcgg
gtcgaggaccagcacctggagcgcgccgcgcaggacagcctcaaggccgccaagctcgcg
cgcgtgcgctacgaggccggcgccgccgacctgttcgaagtgctcgacgccgaacgcacc
cagctgcaggcgcaggacgcgttcgccgacggccgcacgcgttcggtcaccggcgcgatc
gccttgtacaaggcgatggccggcggttggccggcgcgcgagccggtgcgcgaaggcatg
gcgcgcaactga
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