Lysobacter yananisis: RDV84_09110
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Entry
RDV84_09110 CDS
T09342
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_09110
01503 Cationic antimicrobial peptide (CAMP) resistance
RDV84_09110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lya03036
]
RDV84_09110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_09110
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_09110
Chromosome and associated proteins [BR:
lya03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RDV84_09110
Transporters [BR:
lya02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RDV84_09110
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RDV84_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
YknX_C
HH_MFP_RND
BSH_RND
BSH_CusB
CzcB_C
RND-MFP_C
HH_EMRA
HH_CzcB
Biotin_lipoyl
HH_YBHG
CPT
Motif
Other DBs
NCBI-ProteinID:
WMT04983
UniProt:
A0ABY9PD32
LinkDB
All DBs
Position
complement(2165682..2166833)
Genome browser
AA seq
383 aa
AA seq
DB search
MNRPLRTLAPLPRAALSAAVAGLVLFAATGCGRSEAETAQAPATPEVLTVKAKAAEPVYD
LSLPARAQAGESAALYARATGFVSERKAELGDKVGAGQVLATISAPEIDQAVREARAVLA
QANADEELAKVNYQRAQQLIGSGAVSKEYFSDRKGNFDVAVAARNAAQARLTSALERQSF
TAVRAPFAGVVVARNIERGDRVVGDSATATVPMFEVAVLDPLRVVVDVPQNVSLQISNGL
QAEVSFPELPGQVFQAEVARSARALSRDAGVMRTELRLPNPDGRIPAGMVGSARLHLPRA
ATAVVLPVSTVVQRAAGTQVATVTPGSTLTYRDVTVGRNLGNEIEVLTGIAPGDTVVLAP
NALLAEGNKVSAKALPPPAAKKS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccccctccgtaccctcgctcccctgccgcgcgccgcgctgagcgccgcggtc
gccggcctcgtgctgttcgccgccaccggctgcggccgcagcgaagcagagaccgcgcag
gcgccggccacgcccgaagtgctcacggtcaaggccaaggccgccgagccggtctacgac
ctgagcctgccggcgcgcgcccaggccggcgaatcggcggcgctgtacgcgcgcgcgacc
ggcttcgtcagcgaacgcaaggccgagctcggcgacaaggtcggcgccggccaggtgctg
gcgacgatctccgcgccggaaatcgaccaggccgtgcgcgaggcgcgcgcggtgctcgcc
caggccaacgccgacgaagaactggccaaggtcaactaccagcgcgcgcagcagttgatc
ggctcgggcgcggtgtcgaaggagtacttcagcgaccgcaagggcaacttcgatgtcgcc
gtggccgcgcgcaacgccgcccaggcgcggctgacctcggcgctggagcggcagtccttc
accgcggtgcgcgcgccgttcgccggcgtggtggtggcgcgcaacatcgagcgcggcgac
cgcgtggtcggcgattcggccaccgccaccgtgccgatgttcgaagtcgccgtgctcgac
ccgctgcgcgtggtcgtggacgtgccgcagaacgtgtcgctgcagatcagcaacggcctc
caggccgaagtgagcttccccgaactgcccggccaggtgttccaggccgaagtcgcgcgc
agcgcccgcgcgctgtcgcgcgacgccggcgtgatgcgcaccgaactgcgcctgcccaac
cccgacggccgcatccccgcgggcatggtcggcagcgcccgcctgcacctgccgcgcgcg
gcgacggcggtggtgttgccggtctcgaccgtcgtgcagcgcgccgccggcacccaggtg
gcgacggtgacgccgggttcgacgctgacgtatcgcgacgtgaccgtgggccgcaacctc
ggcaacgagatcgaagtgctgaccggcatcgccccgggcgacaccgtggtgctggcgccg
aatgcgttgttggccgagggcaacaaggtcagcgcgaaggcgctgccgccgcctgcggcc
aagaagtcctga
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