Lysobacter yananisis: RDV84_12360
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Entry
RDV84_12360 CDS
T09342
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
lya
Lysobacter yananisis
Pathway
lya00540
Lipopolysaccharide biosynthesis
lya01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RDV84_12360 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lya01005
]
RDV84_12360 (lpxC)
Enzymes [BR:
lya01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RDV84_12360 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
lya01005
]
Lipid A
RDV84_12360 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WMT05595
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All DBs
Position
2914325..2915236
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AA seq
303 aa
AA seq
DB search
MSRQRTLKTVIRATGVGLHSGEKVFLTLRPAPVDTGIVFRRTDLDPVVEMPARADLVTET
TLCTGLTYGAGKVMTVEHLLSAMAGLGIDNCYVELSAPEVPIMDGSAGPFVFLLQSAGIA
EQDAPKRFIRIKHPVEVRDGDKIARFEPFDGFRLGFTVVFDHPAIPASQSRAQVEFSTQN
YIREVSRARTFGFMRDLEYMRERNLGLGGSMDNAIVLDEFRVLNDDGLRYADEFVRHKIL
DAVGDLYLAGHAIIGAYEGYKSGHALNNKLVRALLAERSSWELVSYPETEAGPVAYGGEA
AFA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccagcgcaccctcaagaccgtcatccgcgccaccggcgtgggcctgcacagc
ggcgaaaaggtcttcctgaccttgcgcccggcgccggtcgacaccggcatcgtgttccgc
cgcaccgatctcgatccggtggtggagatgcccgcgcgcgccgatctggtcaccgagacc
acgctgtgcaccggcctgacctacggcgccggcaaggtcatgaccgtggagcacctgctc
tcggcgatggccgggctgggcatcgacaattgctatgtcgaactgtccgcgccggaagtg
ccgatcatggacggctcggccggtccgttcgtgttcctgctgcagtccgccggcatcgcc
gagcaggacgcgcccaagcgtttcatccgcatcaagcacccggtggaagtgcgcgacggc
gacaagatcgcccgtttcgaaccgttcgacggtttccgcctgggcttcaccgtggtgttc
gaccacccggccatcccggcctcgcagtcgcgcgcgcaggtcgagttctcgacccagaac
tacatccgcgaagtcagccgcgcccgcaccttcggcttcatgcgcgacctggaatacatg
cgcgagcgcaacctcggcctcggcggctcgatggacaatgcgatcgtgctcgacgaattc
cgcgtgctcaacgacgacggcctgcgctacgccgacgagttcgtccgccacaagatcctc
gacgcggtcggagacctgtacctggccggccacgccatcatcggcgcctacgagggctac
aagtccggccacgcgctcaacaacaagctggtgcgcgcgctgctggccgagcgctcgtcg
tgggagctggtgagctacccggagaccgaggcgggcccggtcgcgtacggcggcgaggcc
gcgttcgcctga
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