Lysobacter yananisis: RDV84_16425
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Entry
RDV84_16425 CDS
T09342
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_16425
01503 Cationic antimicrobial peptide (CAMP) resistance
RDV84_16425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_16425
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_16425
Transporters [BR:
lya02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RDV84_16425
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RDV84_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Patched
MalF_P2
Motif
Other DBs
NCBI-ProteinID:
WMT01561
UniProt:
A0ABY9P3U5
LinkDB
All DBs
Position
3918888..3921968
Genome browser
AA seq
1026 aa
AA seq
DB search
MNFSAWAIRRPLPAMMVFFVLCVAGLWGFHQLPVARFPDIAFPMTTVTVTQPGASPSQLE
AEVTRKIEDSVATVTNVKRVMSTVSEGVSTTQIEFQLEADLATALDDTRDAVTRIRTDLP
QDIQEPVISKVEIGGSLMTYALVAPQMSADEASWFVDREVSRAMYGVPGVARVTRVGGVD
RQVRVDMDPNALLAYGVTAGAVSRQLAAIQVERAGGKAELDGAQQTIRTLGTVADAKALR
DYSISLPDGRAVRLSTLARVSDAAADPSEAALLDGRDVVAFSMSRTRGSSEVKVEAGVHA
ALDRLKAGHPGIDFRLVTTAIDETHRSYDSSMTMLWEGALLALLVVFAFLRNWRATWVSA
LALPLSIIPTFAVMYWFGFTLNLITLLALSVVVGILVDDAIVEIENIVRHLRMGKPPLEA
AREAAGEIGNAVIATSLTLAAVFVPVAFMPGIAGKFFREFGWTAATAVLFSLLVARLLTP
MMAAYLLKPHGEETGDTRLMRWYLGWVDAALRHRARTLWIATALFVASLALVPLIPATFI
PQSDLGRSNLSLELPPGTRLEETRAVAERARALLKDMPELKQVYTAIGSVLDLGDPSTTG
VPDVRKATLVLDWGLADDRERDQRALERDARARLADLAGVRVSYVSSEPGNLLQLVLSGD
DPQRLQDASIALERDLRAIPGLGSVTSSASLLRPEIQIVPNPARAADLGVATADIAEAAR
IATAGDYEQRLAKLNLPDRQIPIRVGFAEATLANPALIGQLRVPGRNGPVPLAAVAEIRM
GSGPSQISRYQRQRNVTLTAELNGRPLGEVMETVQGLPSVKQLPPGVSFLNTGDAEVFVE
LFIGFLLAMAAGLACIYMVLLLLFNHALMPLTILTAVPLCAGGAFGALLLTQNMLSLPAL
IGLLMLIGIATKNSILLVDYAVIAEDEHGMTQHDALIDACRKRAQPIVMTTLAMGAGMMP
IALGFSGDSSFRAPMAIAVIGGLITSTLLSLIVIPAAFTVIDDLGEWLTRKFRHRSSHPA
PPAASG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttctccgcctgggcgatccgccggccgctgccggcgatgatggtgttcttcgtg
ctctgcgtcgccggactgtggggcttccaccagttgccggtggcgcgctttcccgacatc
gcgttcccgatgaccacggtcacggtgacccagccgggcgcctcgccgagccagctggag
gccgaggtcacccgcaagatcgaggactcggtggccaccgtcaccaacgtcaagcgggtg
atgtcgacggtcagcgagggcgtgagcaccacccagatcgagttccagctcgaagccgac
ctggccaccgcgctggacgacacccgcgacgcggtcacccgcatccgcaccgacctgccg
caggacatccaggaaccggtgatctccaaggtcgagatcggcggctcgctgatgacctac
gcgctggtggcgccgcagatgagcgcggacgaggccagctggttcgtcgatcgcgaagtc
tcccgcgccatgtacggcgtgcccggcgtggcccgggtcacccgggtcggcggcgtggat
cggcaggtgcgggtggacatggaccccaacgccttgctcgcttacggcgtcaccgccggc
gccgtgtcgcggcagctggcggcgatccaggtcgagcgcgccggcggcaaggccgagctg
gacggcgcgcagcagaccatccgcaccctgggcaccgtcgccgatgccaaggcgctgcgc
gattactcgatcagcctgcccgacggacgcgcggtgcggctgtccacgctggcgcgggtc
agcgacgccgccgccgaccccagcgaagcggcgctgctggacggccgcgacgtggtcgcc
ttctcgatgtcgcgcacgcgcggctccagcgaggtcaaggtcgaagccggcgtgcacgcg
gcgctggaccggctcaaggccggccaccccggcatcgatttccgcctggtcaccaccgcc
atagacgagacccaccgctcctacgattcgtcgatgacgatgctgtgggagggcgcgctg
ctggcgctgctggtggtgttcgcgttcctgcgcaactggcgcgcgacctgggtgtcggcg
ctggcgctgccgctgtcgatcatcccgaccttcgcggtgatgtactggttcggcttcacc
ttgaacctgatcaccctgctggcgctgtcggtggtggtcggcatcctggtcgacgacgcc
atcgtcgagatcgagaacatcgtgcgccacctgcgcatgggcaagccgccgctggaggcc
gcgcgcgaggccgcgggcgagatcggcaacgcagtgatcgcgacctcgctgaccctggcg
gcggtgttcgtgccggtggcgttcatgcccggcatcgccggcaagttcttccgcgagttc
ggctggaccgcggcgaccgcggtgctgttctcgctgttggtcgcgcgcctgctcaccccg
atgatggcggcctacctgctcaagccgcacggcgaggaaaccggcgatacccggctgatg
cgctggtacctgggctgggtcgacgccgcgctgcgccatcgcgcgcgcacgctgtggatc
gccaccgcgctgttcgtcgcttcgctggcgctggtgccgctgatcccggccaccttcatc
ccgcagtcggacctgggccgcagcaacctgagcctggaactgccgccgggcacgcgcctg
gaggagacccgcgcggtcgccgagcgcgcgcgcgcgctgctcaaggacatgcccgaactc
aagcaggtctataccgcgatcggcagcgtgctggacctgggcgacccctcgaccaccggc
gtgccggacgtgcgcaaggccaccttggtgctggactggggcctggccgacgaccgcgaa
cgcgaccagcgcgcgctcgagcgcgacgcgcgcgcgcgcttggccgacctggccggggtg
cgggtgagctatgtcagttccgagcccggcaacctgctgcaactggtgctgtccggcgac
gatccgcagcggctgcaggacgcctcgatcgcgctggagcgcgatctgcgcgcgatcccg
gggttgggcagcgtgacctcgtcggcgtcgctgctgcggccggaaatccagatcgtgccc
aatccggcccgcgccgccgacctgggcgtggcgaccgccgacatcgccgaggccgcgcgc
atcgccaccgccggcgactacgaacagcgcctggccaagctcaacctgccggaccggcag
attccgatccgggtcggcttcgccgaggcgacgctggcgaatccggcgttgatcggccag
ctgcgcgtgcccggccgcaacggcccggtgccgctggcggcggtcgccgagatccgcatg
ggcagcggcccttcgcagatttcgcgctaccagcgccagcgcaacgtgaccctgaccgcc
gaactcaacggccgcccgctgggcgaggtcatggagacggtgcaggggctgccgagcgtc
aagcaactgccgccgggcgtgagcttcctcaacaccggcgacgccgaggtcttcgtcgaa
ctgttcatcggcttcctgttggcgatggcggcggggctggcctgcatctacatggtgctg
ttgctgttgttcaaccacgcgctgatgccgctgaccatcctgaccgcggtgccgctgtgc
gccggcggcgcgttcggcgcgctgctgctgacccagaacatgctgtcgctgccggccttg
atcggcctactgatgctgatcggcatcgccaccaagaactcgatcctgctggtggactac
gcggtgatcgccgaggacgagcacggcatgacccagcacgacgcgctgatcgacgcctgc
cgcaagcgcgcccagccgatcgtcatgaccacgctggcgatgggcgcgggcatgatgccg
atcgcgctgggcttctccggcgactccagcttccgcgcgccgatggcgatcgcggtgatc
ggcggcctgatcacctcgaccctgctcagcctgatcgtgattccggcggccttcaccgtc
atcgacgacctaggcgaatggttgacccgcaagttccgccatcgctcctcgcacccggcg
ccgccggcggcgtcgggctga
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