Lysobacter yananisis: RDV84_17740
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Entry
RDV84_17740 CDS
T09342
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_17740
01503 Cationic antimicrobial peptide (CAMP) resistance
RDV84_17740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lya03036
]
RDV84_17740
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_17740
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_17740
Chromosome and associated proteins [BR:
lya03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RDV84_17740
Transporters [BR:
lya02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RDV84_17740
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RDV84_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
WMT01801
LinkDB
All DBs
Position
4231464..4232612
Genome browser
AA seq
382 aa
AA seq
DB search
MRQLTNNREGGPAVRVTAAVAALALACALGLSACKGGAGAADAQAKEGKDKVSDAVPVEI
AAATRRAIAASYTGTAPLEARAESQVVAKTSGVALDVMVVEGQQVKAGQVLVRLDSARAE
QQAAQTGATLRKLEANYARSRQLAEQRLLSANDNDQLRYDMENARAANRLANLELSYAKV
EAPISGVVASRSIKAGNFVQINSPIIRIVDTSMLEATLNVPERELATLKAGQPVQMTVDA
MPGKSFEGKVDRIAPVVDSGSGTFRVICSFVGGGVLQPGMFGRLRIDYDSRADALVVPRA
ALLDDEGDPAVFVVRGNKVARTSVKLGYLDGSWAEVRQGVKLGDQVVVAGKTALREGSEV
LPINAKPVASAAAPAAKAPIKQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaactcaccaacaaccgcgagggcggtccggcggtgcgcgtcacggcagcggtg
gctgcattggcgctggcctgcgcgctgggcctgtcggcctgcaagggcggcgcgggcgcc
gccgacgcgcaggccaaggaaggcaaggacaaggtatcggacgccgtaccggtggagatc
gccgcggcgacccggcgcgcgatcgccgccagctacaccggcaccgcgccgctggaggcg
cgcgccgagtcgcaggtggtggccaagacctccggcgtggcgctcgacgtgatggtcgtg
gaaggccagcaggtcaaggccgggcaggtgctggtgcggctggattcggcccgcgccgag
cagcaggcggcgcagaccggcgcgaccctgcgcaagctcgaggccaactacgcccgctcg
cgccagttggccgagcagcgcctgctcagcgccaacgacaacgaccagctgcgctacgac
atggaaaacgcgcgcgccgccaatcgcctggccaacctggaactgtcctacgccaaggtc
gaggcgccgatttccggcgtggtcgcctcgcgttcgatcaaggccggcaacttcgtccag
atcaactcgccgatcatccgcatcgtcgacacctcgatgctggaagccaccctcaacgtg
cccgagcgcgagctggccacgctgaaggccggccagccggtgcagatgacggtcgacgcg
atgccaggcaagagcttcgagggcaaggtcgaccggatcgcgccggtggtggattccggc
agcggcaccttccgggtgatctgctcgttcgtcggcggcggcgtgctgcagccgggcatg
ttcgggcgcctgcgcatcgactacgacagccgcgccgacgcgctggtggtgccgcgcgcg
gcgctgctggacgacgagggcgatccggcggtgttcgtggtccgcggcaacaaggtcgcg
cgcacctcggtcaagctgggctacctcgacggctcgtgggccgaagtgcgccagggcgtg
aagctcggcgaccaggtcgtggtggccggcaagaccgcgctgcgcgaaggcagcgaagtg
ctgccgatcaacgccaagccggtcgccagcgcggccgcgccggccgcgaaggcgccgatc
aagcagtaa
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