Lysobacter yananisis: RDV84_19545
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Entry
RDV84_19545 CDS
T09342
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_19545
01503 Cationic antimicrobial peptide (CAMP) resistance
RDV84_19545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lya03036
]
RDV84_19545
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_19545
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_19545
Chromosome and associated proteins [BR:
lya03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RDV84_19545
Transporters [BR:
lya02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RDV84_19545
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RDV84_19545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CusB
YknX_C
BSH_CzcB
BSH_RND
Biotin_lipoyl
BSH_YknX
CzcB_C
HH_EMRA
HH_MFP_RND
N_NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
WMT02138
UniProt:
A0ABY9P4Z6
LinkDB
All DBs
Position
4662540..4663658
Genome browser
AA seq
372 aa
AA seq
DB search
MNSTTACLLLAGATALLCACSQQKPATPRAPESVRAVTVARVESRALASAASASGLLVAR
EEAAVGVEQAGVRVLRVLVEEGARVRAGQPLAVLDDALLRERLAQARAQAAQAGSEAERV
RGLDGSGVMSEEEIGRRRSQARIAQAQLRELETQSRQTTVRAPVSGVVIERSARPGSLSG
GEPLFRIVRDDQVELDAEVPETAILGIEPGQPVAVTLADGQVFAGRVRLVSPRIDPKTKL
GRVRVALPVAADLRVGGFARAAFAGRSAPVATVPEKAVHFEASGPQLTLIDRDDRARRIA
VKTGRRSGGVVELLQGPPVGSRVALAGGAFLIDGDRVRPEAVVPEPVAPEPVSPEPVAPA
PHAPKPASAAER
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaccaccgcctgcctgctgctcgccggcgccaccgcgctgctgtgcgcgtgt
tcgcaacaaaaacccgccacgccgcgggcgccggagagcgtgcgcgcggtgacggtcgcg
cgggtggaaagccgcgcgctggccagcgccgccagcgcctcgggcttgctggtcgcgcgc
gaggaagccgcggtcggcgtcgaacaggccggcgtgcgggtgctgcgggtgctggtcgag
gaaggcgcgcgagtgcgcgcgggccagccattggcggtgctcgacgacgcgctgctgcgt
gaacgcctggcgcaggcgcgcgcgcaggcggcccaggccggcagcgaagccgaacgcgtg
cgcggcctcgacggcagcggggttatgtcggaggaagagatcggccgccgccgcagtcag
gcccgcatcgcccaggcgcagttgcgcgaactggaaacgcagtcgcggcagaccaccgtg
cgcgcgccggtgtctggcgtggtgatcgagcgcagcgcgcgcccgggttcgctgtccggc
ggcgagccgctgttccgcatcgtccgcgacgaccaggtcgaactcgacgccgaagtgccc
gaaaccgcgatcctcggcatcgagccgggccagccggtcgcggtcacgcttgccgacggc
caggtcttcgccggccgggtgcggctggtgagcccgcgcatcgatcccaagaccaagctc
ggacgcgtgcgcgtggcgctgccggtcgcggcggacctgcgcgtgggcggcttcgcccgc
gccgccttcgccggccgctccgcgccggtcgcgacggtgccggaaaaggccgtgcatttc
gaggccagcggcccgcagctgaccctgatcgaccgcgacgaccgtgcccgccggatcgcg
gtgaagaccggccggcgctcgggcggcgtggtcgaattgttgcagggaccgccggtcggc
agccgggtcgcgctggccggcggcgcgttcctgatcgacggcgaccgggtccggccggaa
gcggtcgtcccggagccggtcgcacctgagccggtttcgcctgagccggtcgcgccggcg
ccgcacgcgccgaaaccggcatccgccgcggagcgctga
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