Lysobacter yananisis: RDV84_19550
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Entry
RDV84_19550 CDS
T09342
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_19550
01503 Cationic antimicrobial peptide (CAMP) resistance
RDV84_19550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_19550
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_19550
Transporters [BR:
lya02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RDV84_19550
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RDV84_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
WMT02139
LinkDB
All DBs
Position
4663660..4666761
Genome browser
AA seq
1033 aa
AA seq
DB search
MKLGISAWSIKNPIPVSVLFIALLLAGLAGYKALPIKLFPDVSFPIVQVAVSLPGAAPSE
VETQITREIEGALASIADVDHVSSTVSLGLSSTTVEFVVGADAQKATDEVRAAIDGVRAT
LPRGIEEPVVRRFDIDQMPILTYAVSAPAMSDVELSWFVDDTVAREVIGARGVAQVARVG
GVEREINVTLDPARLEALGLSAPQVNDALRGFSADIGGGSARIGGHQQTVRVLNAAQNVE
SLRQLTIPTGDGRNVRLGDVAQVGSGGAERSSLALLDGAPVVGFQVMKTKAASDVEVEAA
TIEAVDDLARRHPGLRFTRILSSAENTRHSFEATVHTLVEGMLLAALVVLAFLRDWRATA
IAAVAMPISLIPTFAIMALLGFSLNMITLLALTLVIGILVDDAIVEIENIQKRIQLGETP
FQAAFEGSDAIGLAVTATTLAIVVVFLPVSFLSGFIGQFFFEFGITVAVSVLSSLVVARM
LTPLMCAYFLAPQAQAHERKPFRGTYRRALDWALDHRWISLALGVAIFVGSLFLAAALPT
GFTPPSDNGIVQISLEGAPGATLDDLQASTQRLTRELRKRDDVQSVFATLATDAAGSSGV
TVLLRADRELTTQQFQADIRALMLSIPDVRLGYGPAGQGGSTVVQVLLSSEDGAALEQAA
RTLERQMRGLPELANVHEVTPRPGTELIVRLKPEQAARLGVSPEAVAAIARVATIGDIDA
NSAKFNAGMERLTVRVRLDDAARGDLDVIGALRVPTASGASVPLAAVADLGFQAGAARIE
RYDRERRAMVEAELHGVSLGQAMARINALPILKQLPPGVTNPAYGQGESQVELFASFGLA
LAAGIFMIYAVLVLLFRSFFKPITILAALPLSLAGAFLGLLLGGAELGLPALIGLLMLMG
LAAKNSILLVEFAIEAERDGASQHQALVSACRERARPIVMTTFAMAAGMVPTALGLGEGS
EFRVPMALAVIGGLISSTVLSLVLVPVVYEFVEDAELWLTPKLSRLITHNPAEPQAPSRT
ATAAAGAGDGGGA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcggcatctccgcctggtcgatcaagaacccgatcccggtcagcgtgctgttc
atcgccctgctgctggccggcctggccggctacaaggcgctgccgatcaagctgttcccg
gacgtgtcgttcccgatcgtgcaggtcgccgtcagcctgcccggcgcggcgccgtcggag
gtcgaaacccagatcacccgcgagatcgaaggcgcgctcgccagcatcgccgacgtcgat
cacgtcagctcgaccgtgtcgctgggcctgtcctcgaccacggtcgaattcgtcgtcggc
gcggacgcgcagaaggccaccgacgaagtgcgcgcggccatcgacggcgtgcgcgcgacc
ctgccgcgcgggatcgaggagccggtagtgcgccgcttcgacatcgaccagatgccgatc
ctgacctacgcagtgtcggcaccggcgatgtcggatgtggagctgagctggttcgtcgac
gacaccgtcgcgcgcgaagtgatcggtgcgcgcggcgtcgcccaggtcgcccgcgtcggc
ggcgtcgagcgcgagatcaacgtcaccctcgacccggcccggctggaagcgctgggcctg
agcgcgccgcaggtcaacgacgcgctgcgcggtttcagcgccgatatcggcggcggcagc
gcgcgcatcggcggccaccagcagaccgtgcgcgtgctcaacgcggcgcaaaacgtggaa
agcctgcgccagctgacgatccccaccggcgacggccgcaacgtgcgcctgggcgacgtc
gcccaggtcggcagcggcggcgccgaacgcagcagcctggccctgctcgacggcgcgccg
gtggtcggcttccaggtcatgaagaccaaggccgcctccgacgtcgaagtggaggcggcc
acgatcgaggccgtcgacgacctcgcccgccgccatcccggcttgcgcttcacccgcatc
ctgtcctcggccgagaacacccgccacagcttcgaggcgaccgtgcacaccctggtcgag
ggcatgctgctggcggcgctggtggtgctggcgttcctgcgcgactggcgcgcgaccgcg
atcgccgcggtggcgatgccgatctcgctgatccccaccttcgcgatcatggcgctgctg
ggcttcagcctgaacatgatcaccttgctggcgctgaccctggtgatcggcatcctggtc
gacgacgccatcgtcgagatcgagaacatccaaaagcgcatccagctcggcgagacgccg
ttccaggcggcgttcgaaggctccgacgcgatcggcctggcggtgaccgcgaccacgctg
gcgatcgtggtggtgttcctgccggtgtcgttcctgagcggcttcatcggccagttcttc
ttcgagttcggcatcaccgtggcggtgtcggtgctgtcctcgctggtggtcgcgcgcatg
ctcacgccgctgatgtgcgcctacttcctcgccccgcaggcgcaggcgcacgaacgcaag
ccgttccgcggcacgtaccgccgcgcgctcgactgggcgctcgaccaccgctggatctcg
ctggcgctgggcgtggcgatcttcgtcggctcgctgttcctggccgcggcgctgccgacc
ggcttcaccccgccgagcgacaacggcatcgtgcagatctcgctggaaggcgcgcccggc
gcgaccctggacgacctgcaggcctcgacccagcgcctgacgcgcgaactgcgcaagcgc
gacgacgtgcagagcgtgttcgcgaccctcgccaccgacgccgccggcagcagcggcgtc
accgtgctgctgcgcgccgaccgcgagctgaccacccagcaattccaggccgacatccgc
gcgctgatgctgtcgattccggacgtgcgcctgggctacgggccggccgggcaaggcggc
agcaccgtggtccaggtgctgctgtcgagcgaggacggcgccgcgctggaacaggccgcg
cgcacgctggagcggcagatgcgcggcctgccggaactggccaacgtgcacgaagtgacc
ccgcgcccgggcaccgagctgatcgtgcggctgaaacccgagcaggccgcgcgcctgggc
gtgagcccggaagcggtcgcggcgatcgcgcgggtggcgaccatcggcgacatcgacgcc
aattcggccaagttcaacgccggcatggagcggctgacggtgcgggtgcggctcgacgac
gccgcgcgcggcgatctcgacgtcatcggcgccttgcgcgtgcccaccgccagcggcgcg
tcggtgccgctggcggcggtcgccgacctcggcttccaggccggcgcggcgcggatcgaa
cgctacgaccgcgaacgccgggcgatggtcgaggccgaactgcacggggtttcgctgggc
caggccatggcccgcatcaacgccctgccgatcctcaagcagttgccgccaggcgtgacc
aaccccgcctacggccagggcgagagccaggtcgagctgttcgccagcttcggtctggcc
ctggccgccggcatcttcatgatctatgcggtgctggtgctgctgttccgcagcttcttc
aagccgatcacgatcctggccgcgctgccgctgtcgctggccggcgccttcctcggcctg
ctgctcggcggcgccgaactgggcctgccggcgctgatcgggctgctgatgctgatgggg
ctggcggcgaagaactcgatcctgctggtggagttcgcgatcgaggccgaacgcgacggc
gccagccagcaccaggcgctggtgtcggcctgccgcgaacgcgcgcggccgatcgtgatg
accaccttcgccatggccgccggcatggtcccgaccgcgctcgggctgggcgaaggctcg
gagttccgcgtgccgatggcgctggcggtgatcggcggactgatcagttcgaccgtgctg
tccctggtcttggtgccggtggtgtacgaattcgtcgaggacgccgaactgtggctgacg
ccgaaactctcgcggctgatcacccacaacccggccgaaccgcaggcgccgtccaggacc
gccaccgccgcggcgggcgcgggcgatggcggcggcgcttga
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