Lysobacter yananisis: RDV84_24300
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Entry
RDV84_24300 CDS
T09342
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
lya
Lysobacter yananisis
Pathway
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
lya01502
Vancomycin resistance
lya02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_24300
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RDV84_24300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RDV84_24300
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lya01002
]
RDV84_24300
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
RDV84_24300
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lya01504
]
RDV84_24300
Enzymes [BR:
lya01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RDV84_24300
Peptidases and inhibitors [BR:
lya01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RDV84_24300
Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RDV84_24300
Antimicrobial resistance genes [BR:
lya01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RDV84_24300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
VldE
MIOS_a-sol
Motif
Other DBs
NCBI-ProteinID:
WMT05918
UniProt:
A0ABY9PFT2
LinkDB
All DBs
Position
5876398..5877204
Genome browser
AA seq
268 aa
AA seq
DB search
MRGHGHVLINTPDIEIWPGGLLRARSNADARALARARHVLRRKRDGRFLAADLPEGVLPL
VHRLMREDGIDAALDALERIVDYRREGLLRVVELPLDRLEQRLDALGLDAADYQARTGLE
LIAEPDRLALAGFDRYRRPLWLHPAAARAWTHLRDAALREGIALESISGYRSHDYQLGIF
ERKRARGQSVEEILTVNAAPGYSEHHSGLALDIGAPGEPPAEEAFERTPAFAWLRDHAGG
HGFAMSYPRGNPHGIVYEPWHWRYAPPA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggacacggccacgtcctgatcaacaccccggacatcgaaatctggcccggcggc
ctgctgcgcgcgcgcagcaacgccgacgcccgcgccctggcgcgcgcgcgccacgtgctg
cggcgcaagcgcgacggccgcttcctcgccgccgacctgcccgagggcgtgctgccgctg
gtgcaccggctgatgcgcgaggacggcatcgacgccgcgctggacgcgctcgaacgcatc
gtcgactaccgccgcgaaggcttgctgcgggtcgtcgaactgccgctggaccggctcgaa
cagcgtctcgacgcgctcggcctcgacgccgccgattaccaggcgcgcaccggcctggag
ctgatcgccgaacccgaccgtctggccctggccggcttcgaccgctaccggcggccgctg
tggctgcatccggccgccgcgcgcgcctggacccacctgcgcgacgcggccctgcgcgaa
ggcatcgcgctcgaatcgatctccggctatcgcagccacgattaccaactgggcatcttc
gagcgcaagcgcgcgcgcggccagagcgtcgaggagatcctcaccgtcaacgccgcgccg
ggctacagcgaacaccacagcggactggcgctggacatcggcgcgcccggcgaaccgccg
gcggaagaggcgttcgaacgcacgcccgccttcgcctggctgcgcgaccacgccggcggc
cacggcttcgcgatgagctacccgcgcggcaacccgcacggcatcgtctacgaaccctgg
cactggcgctacgcgccgccggcctga
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