Lysinibacillus sp. CD3-6: FH508_0003870
Help
Entry
FH508_0003870 CDS
T08381
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc01501
beta-Lactam resistance
lyc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FH508_0003870
01503 Cationic antimicrobial peptide (CAMP) resistance
FH508_0003870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyc02000
]
FH508_0003870
01504 Antimicrobial resistance genes [BR:
lyc01504
]
FH508_0003870
Transporters [BR:
lyc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FH508_0003870
Antimicrobial resistance genes [BR:
lyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FH508_0003870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
DUF16
Motif
Other DBs
NCBI-ProteinID:
UED81036
LinkDB
All DBs
Position
856996..860049
Genome browser
AA seq
1017 aa
AA seq
DB search
MNISNFSIKRPVFTLVSMLLIIILGGVSLLKIPITLIPELNPPIGVVVTSYPGASSTEVN
EKVTKPLEATLATLPGIKKLQSTSQEGSNLIVLEFNWTTDIEEVQLDILQRIDMTPLPSD
AQKPSFLKFDPSQFPIIQLSLRADNDQVDVRILADSLEKELRRTEGVASVNVSGKLIEEV
QVTLDESKLIAKGLTQADIIQIIQTNNVSLPGEPVLTADGQMLSTRIISTLTKPEDIADL
IVSVNPIDGETLTVGDVATVERAEQKSLTETRANDHPAVLMSVLQESGANTAEVSKAFQQ
SLNDLLAQEQYKGVVADVLVDQGNYVNLAISNIGSSLLLGGLFAMLVLFVFLRGVKSPII
IGIAIPYSVIVTFVLMYFAHFTLNIMTLGALALGIGMLVDNAIVVIENVERHLGLGKNPI
EAAKQGTKEVALAITASTLTTIAVFIPVMFIEGLIGQIFTEFALTISFSLIASLLVALTV
VPMLASRLLKMKDQNINEMRKASAFYKHYNASIVWVLKHRFLVILSAVILFGLSVFGLSR
IGTEFLPATDEGFASISVDLDRGAAVTKTEQVVTAIEERLKEEQDVDVYVSLIGGTQQSQ
ARGQTSANRAEIYVKLVPLADRKRSIFEFVEEVEKDLNNELGEQADITFNVSTSSGSSPN
TLTFRLTDSNEQRLQESVDKVQQELKRINIVTNVMTDLDNTVQEIQIEVDREKAKDYGFL
PAQIAQTVNQMTKGQLTTQMIDDDGTVLSVYTGFGQSFNESIESLKAMELRSPAGLFVKL
DEIAHVSIQEGPVSIRRSDQAAAVAFFVDYTTKESLGGISKEVDKALEKANLPSETQVVF
SGDRELYDSAIDDMLLAVALAVVLVYIVMAAQFESFKYPFVIMFTVPLMIIGVTIAMFAT
KTLLGVTSVIGILVLVGIVVNNGIVLVDYINQQKMNGMKSYDAILLATQDRLRPILMTAL
TTILGLLPLALGIGEGTEMNQPMGIAVIGGLITSTLLTLYIVPAVYSLMDKETRRLP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaacattagcaacttttcgataaaaaggcctgtttttacacttgtgtcgatgctacta
atcattattttaggtggcgtatcattgttaaaaataccaatcactttaattcctgaatta
aatccaccaataggtgttgttgttacctcctatcctggtgcgagctcaacggaagtgaat
gagaaggtaacaaaacctttagaggcgacattggccaccttgccaggcataaaaaaactt
caatctacctcacaggaaggttcaaatttaattgtgctcgagtttaattggacaacggat
atagaagaagttcaactcgacattttacagcgaattgatatgacaccgttaccgagtgat
gcacaaaaaccaagttttttaaaatttgacccatcacagtttccaattattcagctttca
ttacgcgcagacaatgatcaggtggacgtgcgtattttagcagattcattggaaaaagag
ctccgtcgtacagaaggagttgcaagtgtaaatgtctctggcaagcttatagaagaagta
caagtaacattagatgaatcgaaattaattgccaaaggcttaacccaagctgatattatt
caaatcattcaaacgaataatgtgtcactgcctggagaaccagtattgaccgctgatggc
caaatgctgtcgacacgtattattagtacattaacaaaaccagaagatattgcggattta
attgtatccgtcaatccaatagacggggaaacactaacggtaggagatgtagcgaccgtc
gagcgtgcagagcaaaaatccttaaccgaaacgcgtgctaatgaccatccagctgtatta
atgtccgttttgcaagagtcaggggcaaatactgccgaagtatcaaaagcgttccaacaa
tccttaaatgacttactagcacaggagcaatataaaggtgtagtagcagatgtattagta
gatcaagggaattatgtgaatttagcgatcagtaacataggttcttcattactattaggt
ggcttatttgcaatgcttgtattatttgtttttttacgaggcgtgaaaagtccaattatt
attggcattgccataccttattctgtcatcgtcacatttgtattaatgtattttgctcat
ttcactctcaatattatgacattaggtgcgttggcattaggcattgggatgcttgttgac
aatgcaatcgttgttattgaaaatgtggaacggcatctagggcttgggaaaaacccaatc
gaagcagcaaagcaaggcacaaaggaagtggcgctagcaataacagcatctacattaaca
acaattgctgtgtttattcccgtaatgtttatagaaggtttaatagggcaaatctttacg
gaatttgcacttacaatttccttcagtttaattgcctcattattagtcgcattaaccgtt
gtaccaatgttggcaagccgtctgttaaaaatgaaagaccaaaacataaatgaaatgcga
aaggcatcggcattttataagcactacaatgcatctattgtttgggttttaaaacatcgt
tttttagttattttatcggccgttatcctcttcggtttatccgtgtttggcttatcgaga
atcggtacggaatttttaccagcaacagatgaaggatttgcttctatcagtgtagatctt
gatagaggtgctgcagtaacaaaaacggaacaggttgtcacagcaatagaggagcgctta
aaagaagagcaagatgtggatgtctatgttagcctaattggcggtacgcagcagtcgcaa
gcacgtggacaaacaagtgcaaatcgagcggaaatctatgtgaagctagtaccacttgca
gatcgtaaacgttcaatttttgaatttgtagaagaggtagaaaaggatttaaacaatgag
ctaggtgagcaagctgacatcacatttaatgtatcaacatcgtcgggttcatctcctaat
acattgacattccgattaactgattcaaatgaacaacgtttacaagagtcagttgataaa
gtacagcaagaactaaagcgcattaacattgtcacaaatgtaatgacagatttagataat
acagtccaagaaattcaaattgaagtagatcgtgaaaaagctaaggattatggcttttta
cctgctcaaatagcccaaacggttaatcaaatgacaaaggggcaactgacgacgcaaatg
attgatgatgatggaactgtgttatcggtgtatacaggctttggtcagtcatttaatgaa
agtattgagtccttaaaggcaatggagcttcgttctccagcaggtctatttgttaagctc
gatgaaatcgcgcacgtatctatacaagaagggccagtatcgattagacgttccgatcag
gctgctgcagttgcatttttcgttgattatacaacgaaggagtcactagggggtatttca
aaagaggtcgataaggctcttgaaaaagctaatttaccttctgaaacacaagtggtgttt
agtggcgatcgtgagctttatgatagcgcaattgatgatatgcttttagctgtagcgttg
gctgtagtgcttgtttatattgtaatggcagcgcagtttgagtcatttaaatatcctttc
gtcattatgtttacggtaccgcttatgattattggtgttacgattgcaatgtttgctaca
aagacattactaggtgtgacatctgttattgggattttggtacttgtgggcattgttgtg
aacaacggtattgtgctagtcgattatattaatcagcaaaagatgaatggcatgaagtcc
tatgatgcgatattacttgctactcaagatcgactgcgaccgatattaatgacggcgtta
acaactatattaggtttgctaccacttgcacttggtattggcgaaggtacggagatgaac
cagccaatgggtatcgctgtaattggtgggcttattacttcgactttactgacattatat
atagtgccagctgtttatagcttaatggataaagaaactagaagattgccttaa
DBGET
integrated database retrieval system
