Lysinibacillus sp. CD3-6: FH508_0012030
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Entry
FH508_0012030 CDS
T08381
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00020
Citrate cycle (TCA cycle)
lyc00785
Lipoic acid metabolism
lyc01100
Metabolic pathways
lyc01110
Biosynthesis of secondary metabolites
lyc01120
Microbial metabolism in diverse environments
lyc01200
Carbon metabolism
lyc01210
2-Oxocarboxylic acid metabolism
Module
lyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FH508_0012030
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FH508_0012030
Enzymes [BR:
lyc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
FH508_0012030
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
UED78198
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Position
complement(2484217..2487039)
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AA seq
940 aa
AA seq
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MSNNVTTVSSPWSAFSGPNLGYVMEQYDLFLQSPEEVEPELVSLFQQFGAPVEVEGDVAV
VSGSAAPAGDYKKVLAAVKLADVIRTQGHLAADIYPLKNRALQTAQIEESAFNLSPADLA
EIPAAIFFKDVPAGVKNGKDAIDFLKSVYTDKVAFEYGHVVATEEREWIQAQVESGSLKQ
ALTSDEKKALLDRLTRVENFEKFIHKTFVGQKRFSGEGLDTQIVLFDEILKTVEANNVEN
VRIGMAHRGRLNVLTHILNKPYDMMFSDFAHVSNDLFMPEHGRLEITKGWTGDVKYHMGA
SYTRESGMNVKLAYNPSHLEVGNPVVLGATRATQDDTSKPGQAVHNPAKGLGILVHGDAA
FPGQGIVTEVLNYSKTEGFSTGGTIHIIANNMIGFTTELQDSRSSVYSSDPAKGYEVPVV
HVNADSPEAVSQVGRFAASYRQKFGKDIVVDLIGYRRHGHNETDDPTVTNPETYKLVAKH
ETIRALYGAQLVAEGLVTAEEVAALDSAIYAEMQVAYDHVKEMAEKDEHKHVEMPEELKI
NFPQIDTAVGAERLDTINEELLVFEQNFEPQKKLGKILEKRRDAFASAKIDWGHAETLAY
ATIIQDGTPVRFTGQDAQRGTFSQRHLVLHDKNNGNVFTPLHHISGASASFTVHNSPLTE
AGVVGFEYGYNLEKGNVLSVWEAQFGDFANMAQVMFDNFISGARSKWGQKSGLVILLPHG
YEGQGPEHSSSRMERYLQMSAENNWFVANCSNAGNYYHLLRRQAAMLETEGVRPLVVVSP
KSLLRHPLAAANAEQLANGAFQEVIEQPGLGSKTKSVERIVLGTGKVMIDLADRVKDGEG
FDHLHIVRVEQLYPFPTTQVADIIAKYPNVKEIVWVQEEPKNQGTWNYALETLYELSEGK
KLRYVGRPAMSSTSEGDADSHKAAQSALIEEAVAETVKVN
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacgttacaactgtaagttctccatggtcagctttctctggtcctaactta
ggatatgtgatggagcaatacgacttattcttacagtctcctgaagaagtagaaccggag
ttagtatcattattccaacaatttggtgcaccagtagaagtagaaggtgatgtagctgta
gtaagtggttcagcagctcctgctggcgattataaaaaggtattggcagctgtaaaatta
gctgatgtaattcgtactcaagggcatttagcagcagatatttatcctttaaaaaatcgt
gcacttcaaacagcacaaattgaagaaagtgctttcaacttaagtcctgcggatttagca
gaaatacctgctgctatcttcttcaaagatgtgccagcgggcgtgaaaaatggtaaggat
gcaatagactttttaaaatctgtatatacagataaagtagcatttgaatacggtcatgtt
gtagcaactgaagaacgtgaatggattcaagctcaagttgaatctggttctttaaaacaa
gctctaacttcagatgagaaaaaagcgcttttagatcgtttaacacgtgttgaaaacttt
gaaaaattcattcacaaaacatttgttggtcaaaaacgtttctctggtgaaggattagat
actcaaatcgtcctttttgatgaaattttaaaaacagtagaagcaaataatgttgaaaat
gttcgtataggaatggctcaccgtggtcgtctaaatgtcctaacacatattttaaataaa
ccatatgacatgatgttctcagactttgcacatgtttcgaacgatttatttatgccagaa
catggccgactagaaattacaaaaggttggactggcgatgtgaaataccacatgggtgct
tcatacactcgtgaatcaggtatgaacgtaaaactagcttataacccttctcacttagaa
gttggaaatccagttgtattaggtgctactcgtgcaacacaggatgatacatctaaacca
gggcaagctgtccacaatcccgctaaaggcctaggtattcttgtgcatggtgatgcagct
ttcccaggtcaaggtattgtaacggaagtattaaactattcgaaaacagaaggtttctca
acaggtggaacaattcatatcattgcaaataatatgattggattcactacggagcttcaa
gactctcgttcttctgtctattcatctgacccagctaaaggttatgaagtacctgttgtt
catgtgaacgcagacagcccagaagcggtatctcaagtaggtcgttttgcagcaagctac
cgtcaaaaattcggtaaagatattgtggttgacttaattggttaccgtcgacatggtcat
aatgaaacagatgacccaactgtaacaaatccagaaacgtacaaacttgtagcaaaacat
gagactattcgtgcattatatggtgcacagttagtagcagaaggattagttactgctgaa
gaggttgcggcacttgattcagctatttatgcggaaatgcaagttgcttacgatcacgta
aaagaaatggcagaaaaagatgaacacaaacatgtagaaatgccagaagaattaaaaatt
aacttcccacaaatcgatacagcagtaggtgctgaacgtttagatacgattaatgaagaa
ctattagtatttgaacaaaacttcgagccacaaaagaaattaggcaaaattttagaaaaa
cgtcgtgatgcatttgcgtctgcaaaaattgattggggccatgctgaaacattagcatat
gctacaattatccaagatggtacacctgtgcgatttactggtcaagatgctcaacgtggt
acattctcacaacgtcatttagtattacatgacaaaaataacggtaacgtatttacacca
cttcaccacatttctggtgcaagcgcttcatttacggtacacaattcaccattaacagaa
gctggggttgttgggtttgaatacggttacaatttagaaaaaggcaacgtactttcagta
tgggaagcacaatttggtgactttgcgaatatggctcaagtgatgtttgataacttcatt
tcaggggcacgttctaaatggggccaaaaatcaggcttagttattcttttacctcacggg
tatgaaggccaaggtcctgaacactcttcaagccgtatggagcgttacttacaaatgtct
gctgaaaataactggtttgtggcaaactgctcaaatgcaggaaactactaccacctatta
cgtcgtcaagcagcaatgttagaaacagaaggtgtgcgtccattagttgttgtatcacca
aaatcattacttcgtcatccattagctgcagcaaatgctgaacaattagcaaatggcgca
ttccaagaagtaatcgaacaaccaggtttaggctcaaaaactaaatctgttgaacgaatt
gtattaggtactggtaaagtaatgattgacttagcagaccgcgtgaaagatggagaaggc
ttcgatcacttacacattgttcgtgtagagcaactttacccattcccaacgacgcaagtt
gctgatattattgctaagtatccaaatgttaaagaaattgtatgggtacaagaagaacct
aaaaaccaaggtacttggaattacgcattggaaacattatatgaactatctgaaggtaaa
aagcttcgttatgtaggtcgtcctgcaatgagctcaacttcagaaggtgatgcagattct
cataaagcagctcaatcagctctaattgaagaagcagttgctgaaacggtaaaagtaaac
taa
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