Lysinibacillus sp. CD3-6: FH508_0021340
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Entry
FH508_0021340 CDS
T08381
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00270
Cysteine and methionine metabolism
lyc00450
Selenocompound metabolism
lyc00670
One carbon pool by folate
lyc01100
Metabolic pathways
lyc01110
Biosynthesis of secondary metabolites
lyc01230
Biosynthesis of amino acids
lyc04980
Cobalamin transport and metabolism
lyc04981
Folate transport and metabolism
Module
lyc_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FH508_0021340 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FH508_0021340 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FH508_0021340 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FH508_0021340 (metH)
04980 Cobalamin transport and metabolism
FH508_0021340 (metH)
Enzymes [BR:
lyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
FH508_0021340 (metH)
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GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
UED79894
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Position
complement(4289068..4292499)
Genome browser
AA seq
1143 aa
AA seq
DB search
MAKHLIEEQLEKRILILDGAMGTMLQNENLSAEDFGGEELDGCNENLVLTRPDVLEKVHR
KYLEAGADIICTNTFGGTPLVLNEYNLGSKAEEINKRAVEIARKVVDEFSTPEWPRFVAG
AMGPTTKTLSVTGGITFDELEENFYVQAKALIEAGSDVLLLETSQDMLNVKAGTLGVSRA
FEDTGKELPVMISGTIEPMGTTLAGQTIDAFYISIEHIKPLSVGLNCATGPEFMTDHIRS
LAELSTGYISCYPNAGLPDEEGCYHESPESLSQKLKGFAEKGWLNIVGGCCGTTPAHIAA
LREVLKDEKPRQLPESTHGHVVSGIEPLVYDDSMRPLFIGERTNVIGSRKFKNLIIDEKY
EEAAEIARAQVKNGAHVIDICLANPDRDELADMRGFMQEVVKKVKVPLVIDSTDEKVIEE
ALKFSQGKAIINSINLEDGEERFDAVMPLVKKYGGSLVVGTIDEQGMAVDRHRKLEIAER
SYQLLTEKWGLAPEDIIFDPLMFPVGTGDEQYIGSALETIEGIRLIKEKMPRTLTVLGVS
NISFGLPPVGREVLNAVYLYHCTQAGLDYAIVNTEKLERYASIPEEEIKLANDLLFNTND
ETLAVFTDFYRDKKKEKTEADIPKTVEGRLAYYILEGTKEGLIEDLDAAREIFDAPLDII
NGPLMEGMAEVGRLFNDNQLIVAEVLQSAGVMKAAVAHLEQFMEKNEDSSGKGKMVLATV
KGDVHDIGKNLVDIILSNNGYKVVDLGIKVTPSQLIEAIRKEKPDFIGLSGLLVKSAQQM
VITAQDFKAAGINVPILVGGAALSRRFTETKIANEYEGPVIYSKDAMQGLEQVNLLMGTE
TRENFLAEIADSRQKRLEADEKRAARPAKEITVKPVRTVKDAPVFLPADVRRHVKKDYSV
SHLYPYVNMRTLIGHHLGLKGQVQQLLDAGDARATELKQLVDEYLQSDLLKPSGLYQFFP
AQADGDDVVVYDPADSKTEIERFTFPRQQVEPFMCLADFLKTVDSGEMDYIALMVVTAGQ
GVMATARQLKEEGKFLESHALQSTALELAEGFAERMHQEIRDQWGFPDNTDFTMRDRFAA
KYQGQRFSFGYPACPNLEDQEKLFGLLKPEDIGVHLTEGFMMEPEASVSAIVFAHPDARY
FNV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcacttgattgaagagcaactagagaaacgaatattaattcttgatggcgca
atgggtacaatgcttcaaaatgaaaacttatcagcagaagattttggtggcgaggagctt
gatggatgtaacgagaaccttgttttaacgagacctgatgtgcttgaaaaggttcaccga
aaatatttagaggctggtgcggatattatttgtacaaatacgtttggaggtacgcctctt
gtattaaatgaatataatcttggctctaaggcggaagaaattaataaacgtgcggtggaa
attgcgcgcaaagtagtagatgagttttctactccagaatggcctcgctttgtagcgggg
gcgatggggccaacgacgaaaacattatcagtaactggcggtattacctttgatgaactg
gaagaaaacttttatgtacaggcaaaggcgttaatcgaagcgggctcggacgtactgctt
cttgaaacgagtcaagatatgctcaatgtaaaagcggggacgctcggggtatcacgtgca
tttgaagacactgggaaagaactacctgttatgatttctggcacgattgagcctatgggc
acaacgctagcggggcaaacgattgatgccttttacatatcaattgagcatattaagccg
ttatctgtcggcttaaactgtgcgactggtccagaatttatgacagatcatattcgttcg
ttagcagagctttctacaggctatattagctgttatccaaatgctggtttgccagacgag
gaaggatgctatcatgaatcgccagaatcattatctcaaaaattaaaaggttttgctgaa
aaaggctggctaaatattgtcggcggttgttgcggaacaacgccagcgcatattgcagcc
cttcgagaagtgttaaaggatgaaaagcctcgtcaattaccagaaagcacacatggtcat
gtggtatctggtattgaacctttagtatatgatgattcgatgcgaccactatttattggt
gagcggacgaatgtaattggctctcgaaaatttaaaaatttaatcattgacgagaaatat
gaggaagctgcagaaatcgcacgtgcacaagtgaaaaacggggcacatgttattgatatt
tgcttagcgaacccagaccgtgatgaattagctgatatgcgtggttttatgcaggaagtt
gtaaaaaaagtaaaagtaccacttgtaattgactctacagatgagaaagtaattgaggaa
gcgctgaaattctcacaagggaaagcgattattaactctattaatttggaggatggagaa
gaacgttttgacgcagttatgccattagtgaaaaaatatggtggctctttagttgtcggt
acaattgatgaacaagggatggcagtagatcgccatcgtaaactagaaattgccgagcgt
tcttatcaattattaacagagaaatggggcttagcaccagaggatattatttttgatccg
cttatgttcccagttggtacaggtgatgaacaatatataggttcagcactcgaaacaatc
gagggtattcgtcttattaaagaaaaaatgcctcgcacgttaacggttctcggtgtaagt
aatatttccttcggcttaccaccagttgggcgtgaagtattgaatgccgtctatttatat
cactgtacacaggcgggcttagattatgcgattgttaacacggagaagttagagcgttat
gcatcgattcctgaagaggaaattaagcttgcaaatgacctattattcaatacaaatgat
gaaacattagcggtattcactgatttttatcgtgataaaaagaaagagaaaactgaagca
gatattccgaaaacagtggaaggacgcttagcttattatattttagaaggtactaaagaa
ggacttattgaggatcttgatgctgcccgtgaaatttttgacgcaccgcttgatattatt
aatggaccattgatggaagggatggctgaggttggccgcttattcaatgataatcagctt
atcgtagcggaagtattacaatctgcaggggtcatgaaggcagctgtagcgcatcttgag
caatttatggagaaaaatgaggacagctcaggtaaaggtaaaatggtgcttgccactgta
aaaggtgatgtgcatgatattggtaaaaacctcgtagatattattttaagtaataacgga
tataaagtcgttgatttaggcattaaagtaacgccatctcagttaattgaggctattcgt
aaagaaaagcctgactttatcggtttatcgggtttgcttgttaaatctgctcagcaaatg
gttatcactgcgcaagactttaaagcagcaggaattaatgtgcctatattagtaggaggc
gcagcattatctcgtcgctttactgaaacgaaaattgcaaacgaatatgaaggacctgtt
atttactcaaaagatgcgatgcaaggtctagagcaagtgaatcttttaatgggtacagag
actagagagaactttttagcggaaatcgctgactcgcgtcaaaaacgattagaggcagac
gagaaacgagcagcacgtccagcgaaagaaatcactgtgaagcctgtacggacagtaaaa
gatgcgccagtctttctgcctgcagatgttcgtcgtcatgttaaaaaggattattcggtg
tcacatttatatccatacgtgaatatgcgaacattgattggtcaccacctaggattaaaa
gggcaggtgcagcaattacttgatgcgggagacgcacgtgcaacagaactaaaacaatta
gttgacgaatatttacaaagtgatttattgaaaccttcaggcttgtatcagtttttccca
gcgcaagcagatggagatgatgtagtcgtatatgatccagcagatagtaaaacggaaatt
gagcgttttacattccctcgtcagcaagtggaaccgtttatgtgtttagcggacttcttg
aaaacagtagatagcggagagatggattatattgcactgatggttgtaactgctggacaa
ggtgtgatggcgacagctcgtcagttaaaagaggaggggaaattccttgaaagtcatgcc
cttcaatcaacagctcttgagcttgccgaaggctttgcggagcgtatgcatcaagaaatt
cgtgatcaatggggcttccctgataacacagatttcacaatgcgcgacagatttgcagcc
aaataccaagggcaacgtttctcatttggctatcctgcctgcccgaacttagaagatcaa
gagaaattatttggcttattaaaacctgaagatattggtgtgcatttaacagaaggcttt
atgatggaaccagaagcgtccgtatctgcaattgtttttgcacatccagatgcaagatat
tttaatgtgtaa
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