Lysinibacter sp. HNR: FrondiHNR_12120
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Entry
FrondiHNR_12120 CDS
T09375
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00550
Peptidoglycan biosynthesis
lyh01100
Metabolic pathways
lyh01502
Vancomycin resistance
lyh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FrondiHNR_12120
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FrondiHNR_12120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FrondiHNR_12120
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lyh01002
]
FrondiHNR_12120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lyh01011
]
FrondiHNR_12120
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lyh01504
]
FrondiHNR_12120
Enzymes [BR:
lyh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
FrondiHNR_12120
Peptidases and inhibitors [BR:
lyh01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
FrondiHNR_12120
Peptidoglycan biosynthesis and degradation proteins [BR:
lyh01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
FrondiHNR_12120
Antimicrobial resistance genes [BR:
lyh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
FrondiHNR_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF1244
Motif
Other DBs
NCBI-ProteinID:
WGD37163
LinkDB
All DBs
Position
2686208..2686987
Genome browser
AA seq
259 aa
AA seq
DB search
MSSALTALKRFRTATLITTALATITLITACAEPKSPQDPGVLSTSAPAVTPAPTEAPAFD
ITKKSIDDPTSLWVISNKTRPLTPIDFAPSDTSMPEGIPNEFSQPLREPASRALEQLYAD
ATEAGLELRITSAYRDYATQENLYNIYTSRDGQEAADTYSARPGYSEHQTGLAVDLDDSG
GCYVKACFADTPAGIWLAENAPNYGFILRYPQGKESITGFTFEPWHFRYVGPELAQEMKR
TDVATMEEFFDLPPAPSYK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggcgctcactgctctaaaaaggtttcgtacggccacactcatcacaaccgcc
ctcgcgacaatcaccctgatcacggcgtgcgcggaacccaagagtccgcaagatccaggc
gttctctccacatcagcacccgccgtcaccccagcccccacagaggcaccagcgttcgac
atcacaaaaaaatctattgatgatcccacctctctctgggttatcagcaacaagacgcgg
cccctcacccccattgactttgcaccctcagacacctcgatgcccgagggaatacccaac
gagttttctcagccactccgtgaacccgcctcccgcgcgctggaacaactctacgcggac
gcaacggaggccggtcttgaactgcgcatcacaagcgcctacagagactatgcaacgcaa
gaaaatctctataacatctatacctctcgagacggccaggaggccgccgatacgtattca
gcccgaccaggctactcggagcatcagactggactcgccgttgatctggacgacagcggg
ggctgctatgtaaaggcctgctttgcggacactccggcgggtatctggctcgcggaaaac
gcccccaactacggttttatcctgcgctacccgcagggcaaggaatcgataacaggattc
acctttgagccgtggcactttcgctacgttggccccgaactggctcaagaaatgaaacga
acggatgtggccaccatggaagagttcttcgacctccccccggcaccatcgtataaataa
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