Protaetiibacter larvae: FLP23_11235
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Entry
FLP23_11235 CDS
T06178
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lyk
Protaetiibacter larvae
Pathway
lyk03030
DNA replication
lyk03410
Base excision repair
lyk03420
Nucleotide excision repair
lyk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FLP23_11235 (ligA)
03410 Base excision repair
FLP23_11235 (ligA)
03420 Nucleotide excision repair
FLP23_11235 (ligA)
03430 Mismatch repair
FLP23_11235 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyk03032
]
FLP23_11235 (ligA)
03400 DNA repair and recombination proteins [BR:
lyk03400
]
FLP23_11235 (ligA)
Enzymes [BR:
lyk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FLP23_11235 (ligA)
DNA replication proteins [BR:
lyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FLP23_11235 (ligA)
DNA repair and recombination proteins [BR:
lyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FLP23_11235 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FLP23_11235 (ligA)
MMR (mismatch excision repair)
DNA ligase
FLP23_11235 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FLP23_11235 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
PTCB-BRCT
HHH
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
QEO10521
UniProt:
A0A5C1Y9G1
LinkDB
All DBs
Position
complement(2373373..2375679)
Genome browser
AA seq
768 aa
AA seq
DB search
MATGSELQAAHAEAEQLTARILELREAYYARDTTLVADSEYDALMHRLEELERLFPELQS
QDSPTQTVGAGTSTGGLATIEHAERMLSLDNVFSPDELRDWCVKTADAAARPVSWLTELK
IDGLALNLRYEHGVLTSAATRGDGRVGELVTENALRLADVPARLAGEGHPALVEVRGEVF
IPVAAFERLNELQAELRERAFAESAERAKGRSAAFDEERARLSAARRFPAFANPRNAASG
GLRQQLDKKDGLELEAALARIGALRLFVHGIGAWPDPPVAAQSEVYDILRGWGLPTTPYS
PVSADVDGVLAYVAHYGEHRHDVEHEIDGIVVKVDELALHDELGATSRAPRWAIAYKYPP
EEVQTRLLDIVVSVGRTGRATPFAVMEPARVSGSTVRQATLHNQDVVKAKGVLIGDTVVL
RKAGDVIPEVLGPVVELRDGTEREFVMPANCPECGTPLAPAKEGDIDLRCPNARACPAQV
RGRVEHIGSRGALDIEGLGEVGAAALTQPESPKPAPLETEAGLFDLTLEQLMPIEVVVRD
VETGERKRLDDGSLDTRTPFRKIVQQARKDQPAIEGPSEAAKTLLDELEKAKSKELWRFL
VALNIRHVGPVAARALADWFGSLAAIRSATRDELAAVDGVGGIIADAVLDWFTVDWHLEI
VERWAAAGVPWATPGHPGPGRAAAIDGPLSGLTIVVTGSMPEHSRDGAQEAVIAAGGKAA
SSVSKKTDYVVIGPGAGSKATKAAELGIPVIEADDFSRFLAEGPSILG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccggatccgagctgcaggcggcccacgccgaggccgaacagctcaccgcccgc
atcctcgaactgcgcgaggcgtactacgcgcgcgacaccacgctcgtcgccgactccgaa
tacgacgccctcatgcaccgcctcgaagagctcgagcgcctgttccccgagctgcagagc
caggactcgcccacccagacggtcggcgcaggcacgagcacgggcggcctcgccacgatc
gagcacgccgagcggatgctgagcctcgacaacgtgttctcgcccgacgagctgcgcgac
tggtgcgtgaagaccgcggacgccgcggcgcgacccgtctcgtggctcaccgagctcaag
atcgacggcctcgccctcaacctgcgttacgagcacggcgtgctcacctcggctgccacc
cgcggcgacggacgcgtcggcgagctcgtcaccgagaacgccctgcgtctcgcggatgtg
cccgcacgtctcgcgggggaggggcaccccgcgctcgtggaggtgcggggcgaggtgttc
atcccggtcgccgccttcgagcgcctcaacgagctgcaggccgaactgcgcgagcgcgcc
ttcgcggaatccgccgagcgcgcgaagggccgctccgccgccttcgacgaggagcgggcg
cggctctcggccgcacgccgcttcccggctttcgccaacccgcgcaacgcggcatccggc
ggtctccgccagcagctcgacaagaaggacggcctcgagctcgaggccgcgctcgcccgc
atcggtgcgctgcgcctgttcgtgcacggcatcggcgcctggcccgacccgccggtcgcc
gcccagagcgaggtgtacgacatcctgcgcggctggggactgccgaccaccccgtacagc
ccggtgagcgcggatgtcgacggcgtgctcgcctacgtcgcccactacggtgagcatcgc
cacgatgtcgagcacgagatcgacggcatcgtcgtgaaggtcgacgagctcgccctccac
gacgagctcggcgccacgagccgtgccccgcgctgggcaatcgcgtacaagtaccctccg
gaggaggtgcagacgcggctgctcgacatcgtcgtctcggtcgggcgcaccggccgggcc
accccgttcgccgtcatggagccggcgcgcgtgtcggggtccaccgtgcggcaggccacc
ctccacaaccaggacgtcgtgaaggcgaaaggcgtgctgatcggcgacaccgtggtgctg
cgcaaggcgggggatgtgatccccgaggtgctcggtccggtggtcgaactgcgcgacggc
accgagcgcgagttcgtgatgcccgcgaactgccccgaatgcggtacgccgctcgcgccc
gccaaggagggcgacatcgacctgcgctgcccgaacgcccgcgcctgccccgcgcaggtg
cgggggcgtgtcgagcacatcggatcgcgcggggcgctcgacatcgagggcctcggcgag
gtgggggcggcggcgctcacccagcccgagagtccgaagccggccccgctcgagacggag
gcggggctgttcgacctcaccctcgagcagctcatgccgatcgaggtcgtggtgcgcgac
gtggagacgggtgagcgcaaacggctcgacgacggctcgctcgacacccgcaccccgttc
cgcaagatcgttcagcaggcccgcaaggaccagcccgcgatcgagggaccgtccgaggcg
gcgaagacgctgctcgacgagctcgagaaggcgaagtcgaaggagctctggcgcttcctc
gtcgccctcaacatccgccacgtggggccggtggccgcgcgcgccctcgccgactggttc
ggctcgctcgccgccatccgctccgccacccgtgacgagctcgccgccgtggacggcgtg
ggcggcatcatcgccgatgcggtgctcgactggttcacggtggattggcacctcgagatc
gtggagcgctgggccgcggcgggggttccgtgggccaccccggggcatccgggacccggg
cgggccgcggcgatcgacgggccgctctccggcctcacgatcgtcgtcacggggtccatg
ccggagcattcccgcgacggcgcgcaggaggccgtgatcgccgcggggggcaaggccgcc
tcgagcgtgagcaagaagaccgactatgtggtgatcgggccgggcgccgggtccaaggcc
acgaaggccgccgagctcggcatcccggtgatcgaggcggacgatttcagccgcttcctc
gccgagggtccgtcgatcctcggctga
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