Lysinibacillus sp. RS11: AB9L17_18725
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Entry
AB9L17_18725 CDS
T11529
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
lyr Lysinibacillus sp. RS11
Pathway
lyr00020
Citrate cycle (TCA cycle)
lyr00270
Cysteine and methionine metabolism
lyr00566
Sulfoquinovose metabolism
lyr00620
Pyruvate metabolism
lyr00630
Glyoxylate and dicarboxylate metabolism
lyr00680
Methane metabolism
lyr00710
Carbon fixation by Calvin cycle
lyr00720
Other carbon fixation pathways
lyr01100
Metabolic pathways
lyr01110
Biosynthesis of secondary metabolites
lyr01120
Microbial metabolism in diverse environments
lyr01200
Carbon metabolism
Module
lyr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyr_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB9L17_18725 (mdh)
00620 Pyruvate metabolism
AB9L17_18725 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
AB9L17_18725 (mdh)
00566 Sulfoquinovose metabolism
AB9L17_18725 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AB9L17_18725 (mdh)
00720 Other carbon fixation pathways
AB9L17_18725 (mdh)
00680 Methane metabolism
AB9L17_18725 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AB9L17_18725 (mdh)
Enzymes [BR:
lyr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
AB9L17_18725 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
DAO
Pyr_redox_2
NAD_binding_8
DUF4265
PCDH15_12th
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
XGY93866
LinkDB
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Position
complement(3639091..3640029)
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AA seq
312 aa
AA seq
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MSLKRKKISVIGSGFTGATAAFLAAQKELGDVVLVDIPQAENPAKGKALDMWEAAPVQGY
DSYVKGTSNYADTADSDVVIITAGVARKPGMSRDDLVQINQDVMKTVSKEVAKYSPNATI
LVLTNPVDAMTYTVYKETGFPKNRVIGQSGVLDTARFCAFVAEELNISVKDITGFVLGGH
GDTMVPLTRYSFAGGIPLETLIPADRLAEIVDRTRNGGAEIVNLLGNGSAYYAPSAALIE
MAEAIIKDQKRILPSIAYLEGEYGYNDLYLGVPTLLGANGVEKIFELELTDTEKAALDKS
AEAVRDVMKVLA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaaacgaaaaaaaatctcagtaattggtagcggttttaccggcgctactgca
gcatttttagcagctcaaaaagaacttggtgatgtagtattggtggatatccctcaagct
gaaaacccagcaaaaggtaaagcattagatatgtgggaagctgcaccggtgcagggttat
gattcttatgttaaaggtacttctaattatgcggatacagctgattctgatgtagtaatc
atcactgctggcgttgctcgtaaaccgggtatgagccgtgatgatcttgttcaaattaac
caagatgtgatgaaaactgtttccaaggaagttgcgaaatactcaccaaatgcaacaatc
ctcgtacttacgaacccagtagatgcaatgacttacactgtatacaaagagactggtttc
cctaaaaatcgtgtaataggtcaatcaggtgtacttgatacggctcgtttctgtgcgttt
gttgctgaagagcttaatatttcagtaaaagacatcacaggttttgttttaggtggtcac
ggtgatacaatggtgccacttactcgttactcattcgctggtggtattccattagaaaca
ttaatcccagctgatcgtcttgcagagattgttgaccgtacacgtaacggtggtgctgaa
atcgttaacctccttggtaatggttctgcatactatgctccttcagcggcacttattgaa
atggcggaagctatcattaaagaccaaaaacgtatacttccatctattgcatacttagag
ggcgaatatggctacaatgatttatatctaggcgttccaacattgcttggtgcaaatggt
gtagaaaaaatctttgagcttgaattgacagacactgaaaaagcagctttagataaatcg
gcagaggctgtccgcgacgttatgaaagttttagcttaa
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