Lysinibacillus sp. YS11: LBYS11_07530
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Entry
LBYS11_07530 CDS
T05299
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00020
Citrate cycle (TCA cycle)
lys00270
Cysteine and methionine metabolism
lys00620
Pyruvate metabolism
lys00630
Glyoxylate and dicarboxylate metabolism
lys00680
Methane metabolism
lys00710
Carbon fixation by Calvin cycle
lys00720
Other carbon fixation pathways
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01120
Microbial metabolism in diverse environments
lys01200
Carbon metabolism
Module
lys_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lys_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LBYS11_07530 (mdh)
00620 Pyruvate metabolism
LBYS11_07530 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LBYS11_07530 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LBYS11_07530 (mdh)
00720 Other carbon fixation pathways
LBYS11_07530 (mdh)
00680 Methane metabolism
LBYS11_07530 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LBYS11_07530 (mdh)
Enzymes [BR:
lys01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LBYS11_07530 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
Glyco_hydro_4
ApbA
DAO
3HCDH_N
Pyr_redox_2
F420_oxidored
MurD-like_N
ThiF
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AUS86189
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All DBs
Position
1588692..1589639
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AA seq
315 aa
AA seq
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MAFRKNKIAVIGAGHTGSTLSLFLAQKELGDVVLVDIPEAENPTKGKALDLLQTGPIEKF
NVSIKGTSQYEDIAGADIVVITAGIPRKPGMSRDDLVTTNAKIIQQVSRQIKHYAPNSIV
VVLSNPVDAMTYVCHKETGFAKNRIIGQSGVLDTARFNTFVAQELHIAPEDVSGFVLGGH
GDEMVPLIRYSYAGGIPLEKLIPQERLQQIVERTRKGGGEIVGLLGNGSAYYAPAAACAQ
MVEIIIKDQRKIIPSIALLEGEYGYHDLFLGVPTILGGNGIESVIELHLTNEEQTALQHS
AEAVKQVIAICQNIE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcgtaaaaataaaatcgctgttattggagcaggccacaccggttccacactg
agtttatttttagcacagaaagaattaggcgatgtagtgcttgttgatattccagaggcc
gagaacccgacaaaagggaaagctttggatttgctacaaacaggccccatcgaaaaattc
aatgtgtccattaaaggcacgagtcaatatgaagatatcgcaggcgcggatattgttgtc
attacagcaggtattccacgtaaaccagggatgagtcgtgatgacttagtcacaacaaat
gctaaaattattcaacaggtttcaagacaaattaaacactatgctccaaatagtattgtt
gttgtgttgagtaatcctgttgatgccatgacgtatgtgtgtcataaggaaacaggcttt
gccaaaaatcgtatcatcggtcaatctggtgtgttagatacagctcgcttcaacacgttt
gtggcgcaggagcttcacattgcaccagaggatgtatcaggcttcgtcctaggaggacat
ggcgatgaaatggttccattaatccgttattcctatgcaggcggcattccattagagaaa
ctaattcctcaggaacgactacagcaaatcgtggagcgtacgcgtaaaggcggcggtgaa
attgttggcttactaggtaatggtagtgcctactatgctccagccgcagcgtgtgcccaa
atggttgaaattattatcaaagatcaacgaaaaattatcccttctattgccctattagaa
ggagaatatgggtaccacgatctctttttaggggtaccaactattttaggtggcaatggc
atcgaatctgtcatcgaattgcacctaacaaatgaagaacaaacagcccttcagcactct
gcagaggctgtgaaacaggtaattgctatttgccaaaacattgaatag
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