Lysinibacillus sp. YS11: LBYS11_08835
Help
Entry
LBYS11_08835 CDS
T05299
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00020
Citrate cycle (TCA cycle)
lys00270
Cysteine and methionine metabolism
lys00620
Pyruvate metabolism
lys00630
Glyoxylate and dicarboxylate metabolism
lys00680
Methane metabolism
lys00710
Carbon fixation by Calvin cycle
lys00720
Other carbon fixation pathways
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01120
Microbial metabolism in diverse environments
lys01200
Carbon metabolism
Module
lys_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lys_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LBYS11_08835 (mdh)
00620 Pyruvate metabolism
LBYS11_08835 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LBYS11_08835 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LBYS11_08835 (mdh)
00720 Other carbon fixation pathways
LBYS11_08835 (mdh)
00680 Methane metabolism
LBYS11_08835 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LBYS11_08835 (mdh)
Enzymes [BR:
lys01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LBYS11_08835 (mdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
DUF1652
DAO
ApbA
OCD_Mu_crystall
Glyco_hydro_4
F420_oxidored
Shikimate_DH
ThiF
Glyco_hydro_4C
Pyr_redox_2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AUS86437
LinkDB
All DBs
Position
1850900..1851838
Genome browser
AA seq
312 aa
AA seq
DB search
MSFRRPKIAIIGAGHTGATVALMVAQKQIGDIVLIDLPDFENAAKGKALDILQAGPIERF
NVQVTATSKYQEIAHADIVVITAGIARKPGMTRQDLIHTNAAIIRTVSEQIKRYAPTSYI
IVLSNPVDAMTYVCLETTGFPKNRVMGQSGVLDTARFNTFIAQALQLAVEDISSFVLGGH
GDEMVPLVRYTYVGGIPLEKLMPQAQIEQLVERTRKGGGEIVALLGNGSAYYAPAAAIVQ
MIEAIVKDQRKVMPIITYLQGEYQVDNACIGVPVVLGGAGIESVIELHLNEEEQQAFNHS
VHQVYQTLAYIK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaggcgacccaaaatcgccatcattggcgctggacatacaggtgcaaccgta
gcgttaatggtcgcacagaaacagatcggggatattgtgcttatcgatttaccagacttc
gaaaatgctgcgaaagggaaggcattagatattctccaagctggaccaatagaaagattt
aacgtacaggtgacggctacttcaaagtatcaggaaatagctcatgctgatattgtggtt
atcacggcaggtattgcaagaaagcctggcatgacacggcaggatttaattcatacaaat
gcggcaatcatccgcacggtaagcgaacaaatcaaacgttatgcgccaactagctatatt
atcgtcttaagtaaccctgtcgatgctatgacctatgtttgtctggaaacaacgggtttt
cccaaaaatcgtgtcatgggacaatcaggtgttttagatacagcgcgctttaataccttt
atcgcacaggctcttcagcttgctgtcgaggatatatcgagcttcgtcttgggtggacat
ggcgatgaaatggtgccactcgttcgctatacgtatgtcggaggaataccattagaaaaa
ttaatgccacaagcacagattgagcaattagtggagcgaacgcgaaaaggtggaggcgaa
attgtcgccctacttggcaatggcagtgcttattatgccccagctgccgccattgtccaa
atgattgaagcgattgtgaaggatcaacggaaagtaatgcccatcattacgtatttacag
ggcgaatatcaagtagacaatgcctgcattggtgtccctgttgttttagggggagctggt
attgaaagtgtaattgaattgcatttaaacgaagaggaacagcaagcatttaatcattcg
gttcaccaagtttatcaaacattagcctatatcaaatga
DBGET
integrated database retrieval system