Lysinibacillus sp. YS11: LBYS11_16965
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Entry
LBYS11_16965 CDS
T05299
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00020
Citrate cycle (TCA cycle)
lys00270
Cysteine and methionine metabolism
lys00620
Pyruvate metabolism
lys00630
Glyoxylate and dicarboxylate metabolism
lys00680
Methane metabolism
lys00710
Carbon fixation by Calvin cycle
lys00720
Other carbon fixation pathways
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01120
Microbial metabolism in diverse environments
lys01200
Carbon metabolism
Module
lys_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lys_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LBYS11_16965 (mdh)
00620 Pyruvate metabolism
LBYS11_16965 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LBYS11_16965 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LBYS11_16965 (mdh)
00720 Other carbon fixation pathways
LBYS11_16965 (mdh)
00680 Methane metabolism
LBYS11_16965 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LBYS11_16965 (mdh)
Enzymes [BR:
lys01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LBYS11_16965 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
DAO
NAD_binding_8
Pyr_redox_2
DUF4265
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AUS87925
LinkDB
All DBs
Position
complement(3387837..3388775)
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AA seq
312 aa
AA seq
DB search
MSLKRKKISVIGGGFTGATAAFLAAQKELGDVVLVDIPQAENPTKGKALDMWEAAPIQGF
DSYVQGTSNYADTANSDVVIITAGVARKPGMSRDDLVQINQSVMKTVSKEIATHSPNATI
LVLTNPVDAMTYTVYKETGFPKNRVIGQSGVLDTARFCAFVAEELKISVKDITGFVLGGH
GDTMVPLTRYSFAGGIPLETLISAERLEEIVDRTRNGGAEIVNLLGNGSAYYAPAAALIE
MAEAIVKDQKRILPSIAYLEGEYGYHDLYLGVPTLLGENGIEKIFELELTDKEKAALDQS
AEAVRNVMKILV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaaacgaaaaaaaatctcagttatcggtggcggttttacaggcgctactgca
gcatttttagcagctcagaaagaacttggtgacgtcgtattagtggatattccacaagca
gaaaacccaacaaagggtaaggcgctagatatgtgggaggcagcaccaatacaagggttt
gactcttatgtgcaaggtacttccaattatgcagatacggcgaattctgacgtagtgatc
attaccgctggtgttgcacgtaaaccaggtatgagccgtgatgaccttgttcaaatcaat
cagagtgttatgaaaactgtttcaaaagagattgctacgcattcaccaaatgctacaatc
cttgtactgacaaacccagttgatgccatgacatacacagtatacaaagaaactggcttc
cctaaaaaccgtgtaattggtcaatcaggtgttcttgatacggctcgtttctgtgcattt
gtggcagaagaacttaagatttcagtgaaagatattactggttttgtattaggtggtcac
ggtgacacaatggtaccgttaacacgttattcatttgctggtggtattccgttagaaaca
cttatttctgctgaacgtttagaagaaattgttgaccgaacgcgtaatggtggagcagaa
attgtcaacttacttggtaacggctctgcctattatgcgcctgctgcggcactaatagag
atggctgaagctattgtaaaagaccaaaaacgtattttaccatctattgcttatttagaa
ggcgagtacggctatcatgatttatacttaggtgttcctacattacttggcgaaaacggt
attgaaaaaatctttgagctagaattaacggacaaagaaaaagcagctttagatcaatcg
gcagaagcagttcgtaatgtgatgaaaattttagtgtag
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