Lysobacter sp. TY2-98: DWG18_04945
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Entry
DWG18_04945 CDS
T05586
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt01501
beta-Lactam resistance
lyt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DWG18_04945
01503 Cationic antimicrobial peptide (CAMP) resistance
DWG18_04945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyt02000
]
DWG18_04945
01504 Antimicrobial resistance genes [BR:
lyt01504
]
DWG18_04945
Transporters [BR:
lyt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DWG18_04945
Antimicrobial resistance genes [BR:
lyt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DWG18_04945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Gaa1
Motif
Other DBs
NCBI-ProteinID:
AXK71703
LinkDB
All DBs
Position
1038664..1042356
Genome browser
AA seq
1230 aa
AA seq
DB search
MSDSPHSLPDAMSPKGGIVEFAVRRRVTVFMAMLTFVLFGVIALRELKVNLLPDLSYPTL
TVRTEYEGAAPAEVETLISEPVEEALGVVKNLRKLRSVSRTGQSDVVLEFAWGTDMDQAS
LEVRDKIETLQLPLEAKPPVLLRFNPSTEPVLRLALTAKNAAEGDSVRRLTELRRYADED
LKKKLEPVDGVAAVKVGGGLEDEIQVEIDQQKLAQLGLSIDTVIQRLGQENVNVSGGRLE
EGTQRYLVRTVNQFQTVDEIRDMLVTTSAAGGGAAASAAAEMARVAAATGNASAMAAAAS
VQSASSGSSTPANGMPVRLKDIATVTQGFKERESVIRLGGREAVELAIYKEGDANTVATA
DAVEKKLKEIRERMPEDVELTTIDDQSQFIRNAISSVKEDAVIGGALAILIIFLFLRDGW
STFVVALSLPVSIITTFFFMGRFGLSLNVMSLGGLALATGLVVDDSIVVLESIAKARERG
LGVLQAAVQGTREVSMAVVASTLTTISVFLPLVFVQGIAGQLFRDQALTVAVAIAISLVV
SMTLIPMLSALQARASELDDSEPAPEHSVDVSLFRDAVLIPWRRVRNRALGALLTLVALP
VTALVGTYRVIRSRPNLYRWPLRSTMRTAFAIPLWVLLLPVRLIALPLWMVGLIIRSLTG
PLFFGAAWAGQRGWRRTGTGVVAPVMVTASKGAMWVYERAERRYIELLPAALKRPALVLG
FAAVAFALTLAAIPLLGADLIPQLAQDRFEMTVKLPPGTPLRETDAIVRRLQQEHEKDSG
IKSLFGVSGSGTRLDANPTESGENIGKITVVMADGGSREVEATETDKLRASIAGVSQAQV
DFRRPQLFSFSAPLEIELRGSDLDSLRVAGDRLTKLLRANPHYADVKSTVEQGFPEVQIR
FDQERAAALGLTTRQIADAVVKKVRGDVATRYSFRDRKIDVLVRASEGDRASVDSIRRLI
VNPGNGRAPVTLESVADVVSTTGPSEIHRADQVRVAIVSSNLRGIDLGAAIKEVDHLVAS
NPLGTDISMHIGGQGDELGESVRSLLFAFGLAIFLVYLVMASQFESLLHPFVILFTIPLA
MVGAVGALLLTRSPVSVVVFIGLILLVGLVVKNAIILIDKVNQLREHGVPKREALVEGAR
SRLRPIAMTTLCTLFGFLPLALAFGEGAEVRSPMAITVMGGLAVSTLLTLVVIPVVYDLL
DRRADEHYVRRARRIAEREAGAHDAEAQPA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccccgcattcgctgccggacgcgatgtcgccgaagggcggcatcgtggaa
ttcgcagtacgacgtcgcgtcaccgtcttcatggcgatgctcacgttcgtgctgtttggc
gtcatcgcgctgcgcgagctcaaggtcaatctgctgcctgacctcagctatccgacgctg
acggtgcgcactgaatatgaaggtgcggcgccggcggaagtggagacgctgatctccgag
ccggtcgaggaggcgctgggcgtggtgaagaacctgcgcaagctgcgcagcgtgtcgcgc
accggccagagcgatgtcgtgctcgagttcgcctggggcaccgacatggaccaggccagt
ctcgaagtgcgcgacaagatcgagacgctgcagcttccgctggaagcgaagccgccggtg
ctgctgcgcttcaatccgtcgaccgagccggtgctgcgcctcgcactcacggcgaagaac
gcggcggaaggcgattcggtgcgccgtctgaccgagctgcgccgttacgccgacgaagat
ctgaaaaagaagctcgagccggtcgacggcgtcgctgcggtgaaggtgggcggcggtctc
gaggacgaaatccaggtcgagatcgaccagcagaagctcgcgcagctcggcctgtcgatc
gacaccgtgatccagcgcctcgggcaggagaacgtcaacgtctccggtggtcgcctggaa
gagggcacgcagcggtacctcgtgcgcaccgtcaaccagttccagaccgtggacgaaatc
cgcgacatgctggtgacgacgtcggcggccggtggcggcgcggcggccagtgccgcggcc
gaaatggcgcgcgtcgctgcagcgacgggcaatgcgagcgcgatggcggccgcggcgtcg
gtgcagagcgcctcgtccggttcgtcgacgccggccaacggcatgccggtgcgactgaag
gacatcgcgacggtgacgcagggcttcaaggaacgcgagtccgtgatccgcctcggcggt
cgtgaagccgtcgagctcgcgatctacaaggaaggcgacgccaatacggtcgccaccgcg
gatgcggtcgagaagaagctcaaggaaatccgcgagcgcatgccggaagacgtcgaactc
acgacgatcgacgaccagtcgcagttcatccgcaacgcgatttccagcgtgaaggaagac
gcggtgatcggtggcgcgctcgccatcctcatcatcttcctgttcctgcgcgacggctgg
agcacgtttgtggtggcgctgtcgctgccggtgtcgatcatcacgacgttcttcttcatg
ggtcgcttcgggctcagcctcaacgtgatgtcgctcggcggcctcgcgctggcgacgggc
ctggtcgtcgacgactcgatcgtcgtgctcgaaagcatcgccaaggcgcgcgaacgcggg
ctgggcgtgctgcaggccgcggtgcagggcacgcgtgaagtgagcatggcggtggtcgcg
tcgacactgaccacgatctcggtgttcctgccgctcgtgttcgtgcagggcatcgcgggc
cagcttttccgcgaccaggcactgaccgtagccgtcgcgatcgcgatctcgctggtcgtc
tcgatgacgctgatcccgatgctgagcgcgctgcaggcgcgtgccagcgagctcgatgat
tccgagcccgcgccggagcactcggtcgacgtctcgctcttccgcgacgccgtgctgatc
ccctggcgtcgcgtgcggaaccgcgccctcggcgcgctgctcacgctcgttgcgttgccg
gtcacggcgctggtcggcacctaccgggtcatccgcagtcgtcccaatctgtatcgttgg
ccgttgcgttcgacgatgcggaccgcgttcgcgattccgttgtgggtgctgctgctgccc
gtgcgcctgatcgcgctgcccttgtggatggtgggtctgatcatccgttcgctcaccggc
ccgctgttcttcggcgcggcgtgggcaggacagcgcggctggcgccggacgggcacgggt
gtcgtcgctccggtgatggtgaccgcgagcaagggcgcgatgtgggtgtacgagcgcgcg
gagcgtcgttacatcgagctgctgccggcggcgctcaagcgtcccgcactggtactcggt
ttcgccgccgtggcgttcgcgctcacgctcgcggcgattccgctgctcggtgcggacctc
atcccgcagctcgcgcaggatcgcttcgagatgacggtcaagctgccgccgggcacgccg
ctgcgcgagaccgatgcgatcgtgcgtcgcctgcagcaggagcacgagaaggactcgggc
atcaaatcgctgttcggtgtgagcggcagcggcacgcgcctcgacgcgaacccgaccgag
agcggcgagaacatcggcaagatcaccgtggtgatggccgacggcggcagtcgcgaagtc
gaagcgacggaaaccgacaagctgcgtgcgtcgatcgccggcgtctcgcaggcgcaggtc
gacttccgtcgtccgcagctcttcagcttctcggcgccgctcgaaatcgagctgcgcggc
agcgatctcgacagcctgcgggtggcgggcgaccgcctgaccaagctgctccgcgcgaac
ccacactacgccgacgtgaagtcgacggtggagcagggtttcccggaagtgcagatccgc
ttcgaccaggagcgggccgccgcactcggcctcaccacgcgccagatcgccgacgcggtg
gtcaagaaggtgcgcggtgacgtcgcgacgcgctatagcttccgcgatcgcaagatcgac
gtgctggtgcgtgccagcgagggcgatcgcgcctcggtggacagcatccgtcgcctgatc
gtgaacccgggtaacggtcgtgcgccggtgacgctggagtccgtcgccgacgtggtgtcg
acgaccggcccgagcgagatccatcgcgccgaccaggtgcgcgtcgccatcgtgtcgtcg
aacctgcgcggcatcgacctcggtgcggcgatcaaggaagtcgaccacctcgtcgcgtcg
aatccgctgggcaccgacatctcgatgcacatcggcgggcagggtgacgagcttggtgag
tccgtgcgttcgctgctgttcgcgttcggcctggcgatcttcctcgtctacctggtgatg
gcctcgcagttcgagtcgctgctgcacccgttcgtcatcctgttcaccatcccgctggcg
atggtcggtgcagtcggcgcgctgttgctcacccgttcgccggtgtcggtcgtcgtcttc
atcggcctgatcctgctggtcggcctggtggtgaagaacgcgatcatcctgatcgacaag
gtcaaccagctgcgcgaacacggcgtgcccaagcgcgaagcactggtggaaggcgctcgc
tcgcgactgcgcccgatcgcgatgaccacgctctgcacgctgttcggcttcctgccgctg
gcgctcgcgttcggtgaaggtgcggaagtgcgctcgccgatggcgatcacggtgatgggc
ggcctcgcggtgtcgacgctgctgacgctggtcgtgatcccggtggtctacgacctgctc
gatcgccgcgccgacgaacactacgtgcgtcgtgcgcgccgcatcgccgagcgcgaggcc
ggggcgcatgacgcggaggcgcaacccgcatga
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