Lysobacter sp. TY2-98: DWG18_05980
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Entry
DWG18_05980 CDS
T05586
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt00020
Citrate cycle (TCA cycle)
lyt00785
Lipoic acid metabolism
lyt01100
Metabolic pathways
lyt01110
Biosynthesis of secondary metabolites
lyt01120
Microbial metabolism in diverse environments
lyt01200
Carbon metabolism
lyt01210
2-Oxocarboxylic acid metabolism
Module
lyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DWG18_05980
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DWG18_05980
Enzymes [BR:
lyt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DWG18_05980
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AXK71879
UniProt:
A0A345ZJF4
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All DBs
Position
1273698..1276526
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AA seq
942 aa
AA seq
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MDSLLKQFAQTSQLGANAAYVEDLYEQYLVAPDSVDPKWKAYFDGVKSGSTTEVPHSAVL
ESIAEAGRQAARGALASCGSAADERQYAVGKLIVAYRSRGHLAANLDPLGLEKMPPAPDL
ELAFHGLSEKDLSAEFSTGGVGGKDRMKLADLVDLLKRTYTGTVGAEFMHIAESDQRRWI
YERMEKAGGRYARSADERKRVLERLTAADGLERYLGTKYVGQKRFSLEGGDSLIPLLDDM
VRRAGTQDAKEIVMGMAHRGRLNVLVNTLGKPPRDLFNEFEGKFEHVHSDLAHQGDVKYH
MGFSADVATPGGPVHLALAFNPSHLEIVDPVVAGSVRSRQTRRGDESRKQILPVLMHGDA
AFAGQGVVMELFQMSQARGFAVGGTVHIVINNQVGFTTSERQDARSTLYCTDVSKMVGAP
VLHVNGDDPDAVLFCGELALDFRNTFGKDVVIDLVCYRRHGHNEADEPAATQPLMYQVIR
KHPTPRELYAKRLIAENVITEADAQAMVDAYRAKMDAGEVTAEVVDVKPDEFTPDWSSFL
TGKLSDPVDTRFDRTKLVELATAINTVPDRITLHPRVAKIYDDRRKMTAGEQPGDWGFAE
NLAYATLLKEGYKLRLVGQDCGRGTFFHRHAILHDQKTDEYYLPLRELVGNPADVAVIDS
LLSEEAVMAFEYGYSTADPMTLDIWEAQFGDFANGAQVVIDQFLSSGEAKWGRLCGLALY
LPHGYEGQGPEHSSARLERYLQLCALDNMIVCTPTTPAQDFHMIRRQMRMTTRKPLVVMT
PKSLLRHKLAVSTLDELANGEFQKLIPDSVTTPKKAKRVVICGGKVYYDLLEDMQKRGAD
DVALIRIEQLYPFPRNELKAELAKYSTKDVVWCQEEPMNQGAWYQIRHHLVACLGAKQSI
HYAGRSRSPSPAAGHFADHVREQQQLIADALVNPLNGEVSEE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
gtggatagccttctgaagcagtttgcccagacctcccaactcggcgcgaacgccgcctac
gtcgaggatctgtacgagcagtacctggtcgcaccggacagcgtcgacccgaaatggaag
gcctacttcgatggcgtgaagagcggctcgacgactgaggtgccgcactccgcggtgctc
gagtcgatcgccgaggccggtcgccaggcggcccgtggtgctctcgccagctgcggtagc
gccgccgacgagcgccagtacgcggtcggcaagctgatcgtcgcctaccgttcgcgcggc
cacctcgcggccaacctcgatccgctcggcctcgagaagatgccgccggcgccggacctc
gaactcgccttccacggcctgtccgaaaaggacctgtccgccgaattcagcaccggcggc
gtgggcggcaaggaccgcatgaagctggccgacctcgttgacctgctcaagcgcacctac
accggcaccgtcggcgccgagttcatgcacatcgccgagtccgaccagcgccgctggatc
tacgagcgcatggaaaaggccggcggccgctacgcgcgcagcgccgacgagcgcaagcgc
gtgctcgagcgcctgacggccgccgacggcctcgagcgctacctcggcaccaagtacgtc
ggccagaagcgcttctcgctggaaggcggcgactcgctcatcccgctgctcgacgacatg
gtccgtcgcgcaggcacgcaggacgccaaggaaatcgtgatgggcatggcccaccgcgga
cgcctcaacgtgctggtcaacacgctcggcaagccgccgcgcgacctgttcaacgagttc
gaaggcaagttcgagcacgtgcacagcgacctcgcccaccagggcgacgtcaagtaccac
atgggcttctccgccgacgtcgccacgccgggcggcccggtgcacctcgcgctggccttc
aatccgtcgcacctcgagatcgtcgatccagtggtcgccggcagcgtgcgctcgcgccag
acgcgccgcggcgatgagagccgcaagcagatcctgccggtgctgatgcacggcgacgcc
gcgttcgcgggccagggcgtggtgatggagctgttccagatgtcgcaggcgcgcggtttc
gccgtcggcggcacggtgcacatcgtcatcaacaaccaggtcggcttcaccacgagcgag
cgccaggacgcgcgttcgacgctgtactgcaccgacgtgtcgaagatggtcggcgcgccg
gtgctgcacgtgaatggtgacgacccggacgccgtgctgttctgcggcgaactcgccctc
gatttccgcaacacgttcggcaaggacgtggtcatcgacctcgtctgctaccgccgccac
ggccacaacgaggccgacgagccggcggcgacgcagccgctgatgtaccaggtgatccgc
aagcacccgacgccgcgcgagctgtacgcgaagcgcctgatcgccgagaacgtgatcacc
gaggccgacgcacaagcgatggtcgacgcgtatcgcgcgaagatggacgccggcgaagtc
accgctgaagtcgtcgacgtcaagcccgacgagttcacccccgactggtcgagcttcctc
acgggcaagctgtcggacccggtcgatacgcggttcgaccgtacgaagctcgtcgaactc
gcgaccgcgatcaacaccgtgccggatcgcatcacgctgcatccgcgcgtcgccaagatc
tacgacgaccgccgcaagatgacggccggcgagcagccgggcgactggggcttcgccgag
aacctcgcctacgcgacactgctcaaggaaggctacaagctgcgccttgtgggccaggac
tgcggccgcggcacgttcttccaccgccacgcgatcctgcacgaccagaagaccgacgag
tactacttgccgctgcgcgagctggtcggtaacccggcggacgtcgccgtgatcgactcg
ctgctgagcgaggaagcggtgatggcgttcgagtacggctattcgacggccgatccgatg
acgctcgacatctgggaagcccagttcggcgacttcgcgaacggcgcgcaggtggtgatc
gaccagttcctgtcgtccggtgaagcgaagtggggtcgcctctgcggtcttgcgctgtac
ctgccgcacggttacgaaggccagggccccgagcacagctccgcccgcctggagcgctac
ctgcagctgtgcgcgctcgacaacatgatcgtctgcacgccgacgacgccggcgcaggac
ttccacatgatccgccggcagatgcgcatgaccacgcgcaagccgctggtcgtcatgacg
ccgaagtcgctgctgcgccacaagctcgcggtgtcgacgctggacgaactcgcgaacggc
gaattccagaagctgatcccggattcggtgacgacgccgaagaaggccaagcgcgtcgtc
atctgcggcggcaaggtctattacgacctgctggaagacatgcagaagcgcggcgccgac
gatgtcgcgctgatccgcatcgaacagctgtatccgttcccgcgcaacgaactcaaggcc
gagctcgcgaagtattcgaccaaggatgtggtgtggtgccaggaagagcccatgaaccag
ggcgcgtggtaccagatccgccatcacctcgtcgcctgcctcggcgcgaagcagtcgatc
cactacgcgggtcgctcgcgctcgccgtcgccggcagctggccacttcgccgaccacgtc
cgcgaacagcagcagctgatcgccgacgcgctggtcaatccgctcaacggcgaggtgtcg
gaggagtaa
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