Lysobacter sp. TY2-98: DWG18_13640
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Entry
DWG18_13640 CDS
T05586
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt01501
beta-Lactam resistance
lyt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DWG18_13640
01503 Cationic antimicrobial peptide (CAMP) resistance
DWG18_13640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lyt03036
]
DWG18_13640
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyt02000
]
DWG18_13640
01504 Antimicrobial resistance genes [BR:
lyt01504
]
DWG18_13640
Chromosome and associated proteins [BR:
lyt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DWG18_13640
Transporters [BR:
lyt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DWG18_13640
Antimicrobial resistance genes [BR:
lyt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DWG18_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
CzcB_C
Beta-barrel_RND_2
HH_YBHG
BSH_CusB
HH_MFP_RND
BSH_RND
RND-MFP_C
BSH_CzcB
HH_AprE
BSH_Fcp1
HH_EMRA
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AXK73222
LinkDB
All DBs
Position
2801516..2802679
Genome browser
AA seq
387 aa
AA seq
DB search
MRLTTLHACALLVLATLALGACSKKDDAKPADAAPAMAVTVVPARAQEIPREIRVSGPVA
AREEMQLGVEVSGLRVTGLYVDVGDFVRRGQVLLDLDARSLQSELEQAQASYREAQAAAS
LAQANLRRAEPLVAQKYISAGQVDELRAARDQANARVATVRAQLDAARLRRSYAELRAPD
DGIVSRRAVQPGQIVASGTELIGLIRDGRLEWRADLADTELAAVNVGDAVMVRAPDGHDV
EGEVRAVPPGVDPATRTGTVYVDLPEPEGLRTGAYLPGRILVGNAQALVVPATAIVQRDG
NPYVFTVDAKGVAHRVRVRTGTTSNGVVEILDGLASSAQVVDQGAGFLGDGDKVRVVPAV
TTTSATPVATAPSTTPARAASESDAAP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcacgacgctccacgcctgcgccctgctcgtcctcgccacgctcgcgctcggc
gcctgcagcaagaaggacgacgccaagcccgccgacgccgcgcccgcaatggcggtgacc
gtcgtgcccgcgcgcgcgcaggagatcccgcgcgagatccgcgtgtcgggccccgtggcc
gcgcgcgaggagatgcagctcggcgtcgaggtgagcggcctgcgcgtcaccggcctgtat
gtcgacgtcggtgatttcgtgcgacgcggccaggtgctgctcgatctcgacgcgcgctcc
ctgcagagcgaactcgaacaggcgcaggcgagctatcgcgaagcgcaggccgcggcgtca
ctcgcgcaggcgaacctgcgtcgcgccgaaccgttggtggcgcagaaatacatttcggcc
ggacaggtcgacgaattgcgcgccgcacgtgatcaggcgaacgcgcgcgtcgccaccgtg
cgtgcgcagctcgacgccgccaggctgcggcgcagctacgcggaactgcgcgcgccggac
gacggcatcgtcagcaggcgcgcggtgcagccgggccagatcgtcgcatcgggtactgaa
ctgatcggtctgatccgcgatggtcgccttgaatggcgcgcggatctcgccgacaccgaa
ctggctgcggtgaacgtcggtgacgcggtgatggtgcgcgcgccggacggccacgacgtc
gaaggcgaagtgcgcgcggtgccgcccggtgtcgatccggccacgcgcacgggcacggtc
tacgtcgacctgccggaacccgaaggcctgcgcaccggcgcgtatctgccgggacgcatc
ctcgtcggcaacgcgcaggcgctggtcgtaccggcgacggccatcgtgcaacgcgacggc
aacccgtacgtgttcaccgtcgacgccaagggcgtcgcgcatcgtgtgcgtgtgcgcacg
ggcacgacgtcgaatggcgtggtcgagatcctcgacggcctcgcgagcagtgcgcaggtg
gttgaccagggcgcgggcttcctcggtgatggggacaaggtgcgcgtcgtgcctgcggtc
accacgacgtcggcgacgccggtcgcgacggcgccatccaccacgcccgcgcgcgccgcg
tcggagtcggacgccgcgccatga
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