Lysobacter sp. CW239: H2514_06020
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Entry
H2514_06020 CDS
T10688
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lyw Lysobacter sp. CW239
Pathway
lyw01501
beta-Lactam resistance
lyw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2514_06020
01503 Cationic antimicrobial peptide (CAMP) resistance
H2514_06020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lyw03036
]
H2514_06020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyw02000
]
H2514_06020
01504 Antimicrobial resistance genes [BR:
lyw01504
]
H2514_06020
Chromosome and associated proteins [BR:
lyw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H2514_06020
Transporters [BR:
lyw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H2514_06020
Antimicrobial resistance genes [BR:
lyw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H2514_06020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CusB
YknX_C
Beta-barrel_RND_2
CzcB_C
HH_EMRA
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QOD92169
LinkDB
All DBs
Position
complement(1357922..1359205)
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AA seq
427 aa
AA seq
DB search
MPRPPRHLVLLPLALAVALVACGGDQAPPQMPAAAVTVVTMKPETTTLTRELPGRTSAFR
VAEVRPQVSGIVEKRLFTEGALVKAGQPLYQLDNAFYRANASSAQAQLARAEATLVSARL
TAERSAELARIDAVSKQDNENAIASLRQAEADTAAARAAVASANVTLGYARITSPISGRI
GKSSVTQGALVTANQPDALATVQQLDPIYVDLTQSASELLQLRKGLAAGTLEDGRSLPVT
ILLEDGTPFDHQGTLEFSEVSVDPGTGSYALRVAVDNPEHLLMPGMYVRAVIGGGVRQDA
ILVPQQGITRDPKGHATAMVVNAENKVEARPVKVSQTVGDKWLVESGLAAGDRVIIAGLQ
KVQPGAPVNATEAGAQAGQAAGEGAKPGSAKPASAGPESGTPEATGPDAATPADAATPAA
DAPASQQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcctccccgtcacttggttctcctgccgttggcgctcgccgtcgcccttgtc
gcctgcggcggcgaccaggcaccgccgcagatgcctgccgctgccgtcacggtggtcacc
atgaagccggaaaccaccaccctgacccgtgaactgcccggccgcaccagcgccttccgg
gtggctgaagtccgtccgcaggtctcgggcatcgtggagaagcgcctgttcaccgaaggc
gctctggtcaaggcggggcagccgctgtatcaactcgacaacgcgttctatcgcgccaac
gcaagcagtgcgcaggcccagctcgcccgcgccgaggcgaccctggtttcggccagattg
acggcggagcgttcagcggaattggccaggatcgatgcggtcagcaaacaggacaacgag
aacgccatcgccagcctgcgccaggccgaggccgacacggccgcagcgcgcgcggcggtc
gccagcgcgaacgtgacgctgggttacgcccgcatcacctcgcccatcagcggccgcatc
ggcaagtcctcggtcacccagggcgcactggtcaccgccaaccagccggacgcgctggcc
acggtccagcagctcgatccgatctatgtcgacctcacccagtcggccagcgaactgctg
caactgcgcaagggcctggcggcgggcacgctggaagacggccgcagcctgccggtcacc
atcctgctggaggacggcacgccgttcgatcaccagggcacgctggagttctccgaagtc
agcgtggacccgggcaccggcagctacgccctgcgcgttgcggtcgacaacccggagcac
ctgctgatgccgggcatgtacgtgcgcgccgtgatcggcggcggtgtccgccaggacgcg
atcctggtgccgcagcagggcatcacccgcgaccccaagggccacgccaccgcgatggtg
gtcaatgccgagaacaaggtcgaagcacgtccggtcaaggtcagccagaccgtcggcgac
aaatggctggtcgaaagcggcctggccgccggggacagggtgatcatcgccggcctgcag
aaggtgcagcccggcgcgccggtgaacgccaccgaagccggcgcacaggccggacaggcg
gctggcgaaggtgccaagcccggctccgccaagcctgcttcggccggcccggagtccggc
acgccggaggccaccggccccgacgccgccacccccgctgatgcggccacgccggctgcc
gatgcaccggcctcgcagcagtaa
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