Lysobacter sp. CW239: H2514_06405
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Entry
H2514_06405 CDS
T10688
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lyw Lysobacter sp. CW239
Pathway
lyw01501
beta-Lactam resistance
lyw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2514_06405
01503 Cationic antimicrobial peptide (CAMP) resistance
H2514_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lyw03036
]
H2514_06405
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyw02000
]
H2514_06405
01504 Antimicrobial resistance genes [BR:
lyw01504
]
H2514_06405
Chromosome and associated proteins [BR:
lyw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H2514_06405
Transporters [BR:
lyw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H2514_06405
Antimicrobial resistance genes [BR:
lyw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H2514_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
CzcB_C
BSH_CzcB
BSH_CusB
BSH_RND
Biotin_lipoyl
BSH_YknX
Beta-barrel_RND
BSH_Fcp1
HH_MFP_RND
Beta-barrel_YknX
DUF4382
Acyl-CoA-dh_C
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QOD92233
LinkDB
All DBs
Position
1437444..1438574
Genome browser
AA seq
376 aa
AA seq
DB search
MRHTTCLRARGCFRATTLILPCLLLLAACKGGPSEATAKGDGEKGPEAVPVEVAAAQQRP
MAASYTGTAPLEAPVEAQVVAKTSGVALEVMVAEGDVVRAGQTLVRLDSDRARLQAAQTS
AQLSKLQNQFARAQKMASEQLIAASDYDQIRFDLANAQAANRLANLELSYADVKAPIGGV
IASVPPKPGNFVQINTPIVRIVDTSVLEATLNVPERELATLTDGLPVALVVDALPGKRFE
GAVERISPVVDAGSGTFRVIARFASAGVLQPGMFGRISIDYDQRANALVVPRSALLEGEG
EAAVFLVDDGKVKRAPVQLGYLDGSWAEVRTGLALGDQVVVAGKSALRDGSVVTVIGDEA
AASKAPAATSPAANSP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacaccacttgcttgcgtgcccgcggctgctttcgtgcaaccaccctgatcctg
ccgtgcctgctgcttctggcggcctgcaaaggagggccgtcggaggcgacggccaagggt
gacggtgaaaaggggccggaagcggtgccggtggaggtggccgcggcgcagcagcgtcca
atggcggccagctacacgggcaccgcgccgctggaggcgccggtcgaggcgcaggtggtg
gccaagacctccggtgtcgcactggaggtgatggtggccgaaggcgatgtggtgcgcgcc
ggccagacgctggtgcggctggattcggatcgcgcacgcctgcaggccgcgcagacctcc
gcacagttgagcaaattgcagaaccagttcgcacgggcgcagaagatggccagcgagcag
ttgatcgccgcgtccgactacgaccagatccgtttcgacctcgccaatgcacaggccgcc
aaccgtctggccaacctcgagttgtcctacgcggacgtcaaggcaccgattggcggcgtg
attgcgtcggtaccccccaagccgggcaacttcgtccagatcaacacgccgatcgtgcgc
attgtcgacacgtcggtgcttgaggcgaccctcaacgtacccgagcgcgagctggcgacg
ctcaccgacgggttgccggtggcgctggtggtggatgccctgccgggcaagcgcttcgag
ggcgcggtggagcgcatctcgccggtggtcgatgcgggcagcggcacgttccgcgtcatc
gcgcggttcgccagcgccggtgtgttgcagccgggcatgttcggccggatcagcatcgat
tacgaccaacgcgccaatgcgctcgtggtgccgcgctccgcgttgctggaaggcgaaggg
gaagcggcggtattcctggtcgacgacggcaaggtcaaacgcgccccggtgcaactgggc
tatctggacgggagctgggcggaagtccgcaccggcctggcgctgggcgaccaggtggtc
gttgccggcaagagcgccttgcgcgacggcagcgtggtgacggtgatcggcgacgaggct
gcggcatcgaaggcgccggccgccacgtcccctgccgcgaacagtccgtaa
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