Lysobacter sp. CW239: H2514_10670
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Entry
H2514_10670 CDS
T10688
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lyw Lysobacter sp. CW239
Pathway
lyw01501
beta-Lactam resistance
lyw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lyw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2514_10670
01503 Cationic antimicrobial peptide (CAMP) resistance
H2514_10670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyw02000
]
H2514_10670
01504 Antimicrobial resistance genes [BR:
lyw01504
]
H2514_10670
Transporters [BR:
lyw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H2514_10670
Antimicrobial resistance genes [BR:
lyw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H2514_10670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QOD90646
LinkDB
All DBs
Position
complement(2410785..2414051)
Genome browser
AA seq
1088 aa
AA seq
DB search
MTDARNGAAEARLGLSGRLAATFQANPLTPILAILGLLLGLVAVMITPREEEPQIDVTMA
NVLVPFEGASARDVEQLVSTPLEQKLSEIEGVKHVYSISRPGMAVLTVEYTVGVERQPAL
VRLYNQVFSNQDWLPPNVGVGQPLIKPKGIDDVPVMALTLWTDDPQRSATDLAEVAHTLE
TELKRVPGTRDVYTIGAPEHIVAVTLDPAKLAVHGLAVADLMQTLQAANTVRHVGERVGP
DGAVPLAAGAFLVDVDGVAELVIGLRDGHPLHLSDVADIRSGADVATQYAWHGAPVGRDG
PVAGIAPAVTLAIAKKPGSNAADITGAITGRVAQLQGELIPEGVHVTVTRDYGRTASDKA
QKLIQKLVFATGSVVLLVLFALGWREAVVVGSAVVLTLALTLFASWAMGFTLNRVSLFAL
IFSIGILVDDAIVVVENIHRHMARGGRTLFEAIPPAVNEVGGPTILATFTVIAALMPMAF
VSGLMGPYMRPIPINASVGMLLSLAIALIVTPWLSLKLLRRHAPASGDAGDTVADEETRL
HRGFGKLMRPFLDPRVGGRRRWWLFGGMAGLVVLAASLAVVQLVVMKMLPFDNKSEFQVV
VDLPEGRTLEDTNALLVELAAVLDTVPEVLDYQGYAGTSAPMNFNGLVRQYFLRRGSNVG
DLQVNLVDKHERDRQSHAIARALRPQLAAVGERHGASVKVVEVPPGPPVLSPLVAEVYGP
DYAGSRELALELAERFRRTEGVVDVDTSVEHAAPRETLVVDRARAARLGVPQSAIAEALQ
AAVSGIDATYVHDGASKYPRPVRLRLPASEQAGMDRLLALQVRGGQGQLVPLSELVSVER
GHWDGAIHHKDLLPVVYVTGDEAGALDSPLYGMFDLVGQLGRDEVDGRHIAQTFITQPPD
TSDFAIKWDGEWQITYETFRDMGIAYAAGMVLIYLLVVAQFRSYLVPLVIMAPIPLTVIG
VMPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINHALAAGRPLEQAVVDACAVRA
KPIVLTGVAAMMGAFFILDDPIFNGLAVSLIFGILVSTVLTLVVIPLLYYTLMHRSRPPL
AESAEELA
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgcgcgcaacggtgcggccgaggcccgcctgggcctgtcgggccggctcgcg
gccaccttccaggccaatccgctgacgccgatcctggcgatcctcgggctgttgctgggc
ctggtcgcggtgatgatcaccccgcgcgaggaggagccgcagatcgacgtgaccatggcg
aacgtgctggtcccgttcgagggcgcgagcgcgcgggatgtcgagcaactggtcagcacg
ccgctggagcagaagctgtcggagatcgaaggcgtcaagcacgtctactccatcagccgc
cccggcatggcggtgctgacggtggagtacaccgtcggcgtggagcgccagccggcgctg
gtgcgtctgtacaaccaggtcttttcgaaccaggactggttgccgccaaacgttggcgtc
ggccaaccgctgatcaagcccaagggcatcgacgacgtgccggtgatggcgttgaccttg
tggaccgatgacccgcaacgcagcgccaccgacctggccgaggtcgcccacaccctggaa
acggagctcaagcgggtgccgggcacgcgcgatgtctacaccatcggcgcgccggaacac
atcgtcgcggtcaccctcgatccggcaaaactggcggtgcacgggctcgcggtggcggac
ctgatgcagacgctgcaggcggccaacacggtgcgccacgtcggtgagcgggtcgggccc
gacggcgcggtgccactggcagcgggcgcgttcctggtcgacgtcgacggtgtggcggaa
ctggtgatcggcctgcgcgacggccatcccctgcatctttccgatgtggccgacatccgc
agtggcgccgatgtcgccacccagtacgcctggcatggcgctccggtcggccgtgatggt
ccggtcgccggcatcgcgccggccgtcaccctcgcgatcgccaagaagccgggcagcaac
gccgccgacatcaccggcgccatcaccggccgggtcgcgcaactgcagggcgagttgatt
cccgaaggcgtccacgtcaccgtcacccgcgactacggccgcaccgccagcgacaaggcg
cagaagctgatccagaagctggtgttcgcgaccggttcggtcgtgctgctggtgctgttc
gcgctgggctggcgcgaggcggtcgtggtcggcagcgcggtggtgctgacgctggcgctg
accctgttcgcgtcgtgggcgatgggcttcaccctcaaccgggtgtcgttgttcgcgctg
atcttctcgatcggcatcctggtcgacgacgcgatcgtggtggtggagaacatccaccgg
cacatggcgcgcggcggcaggaccctgttcgaggcgatcccgccggcggtcaacgaggtc
ggcggcccgaccatcctggcgaccttcaccgtgatcgccgcgctgatgccgatggcgttc
gtgtccggcctgatgggcccgtacatgcggccgatcccgatcaacgcctcggtcggcatg
ctgctgtcgctggccatcgcgctgatcgtcaccccgtggctgtcgctcaaactgctgcgt
cgccacgcgcctgccagcggtgatgccggcgataccgtcgccgatgaggaaacccgtctg
caccgcgggttcggaaagctgatgcgcccgttcctcgacccgcgcgttggtggacggcgc
cgctggtggctgttcggcggcatggccgggctggtggtgctggccgcatcgctggcggtg
gtgcagctggtggtgatgaagatgctgccgttcgacaacaagtccgagttccaggtggtc
gtggatctgcccgagggccgcaccctggaggacaccaacgcgttgctggtggagctggcc
gccgtgctggacaccgtgcccgaggtgctcgactaccagggctatgccggcacgtccgcg
ccgatgaacttcaacgggctggtgcggcagtacttcctgcgccgcggaagcaatgtcggc
gacctgcaggtgaacctggtcgacaagcacgagcgcgaccgccagagccatgccatcgcc
cgtgcattgcgaccgcaactggcggccgtcggcgagcgccacggcgcgtcggtcaaggtg
gtggaagtcccgcccggcccgcccgtgctgtcgccgctggtcgccgaggtctacgggccc
gattacgcgggcagtcgcgaactggcgctggaactggccgagcgtttccgccggaccgaa
ggcgtggtcgacgtggataccagcgtggagcacgccgcgccgcgcgagaccctcgtcgtc
gaccgcgcccgtgccgcgcgcctgggcgtaccgcagtccgcgattgccgaggcattgcag
gcggcggtgtccggtatcgatgccacctatgtgcatgacggcgcatccaagtacccgcgc
cccgtgcgcttgcgcctgccggcgtcggagcaggccggcatggaccggctgctggcgctg
caggtgcgcggcggccaaggccagctggtgccgctgtcggagctggtgagcgtcgagcgt
ggccactgggacggcgcgatccaccacaaggatctgctgccggtggtgtacgtgaccggc
gacgaggccggcgcgctggatagcccgctgtacggcatgttcgatctggtcggccagctc
gggcgcgatgaggtggacggccggcacatcgcccagaccttcatcacgcaaccgcccgat
accagcgatttcgcgatcaagtgggacggcgaatggcagatcacctacgagaccttccgc
gacatgggcatcgcctacgcggccgggatggtgctgatctacctgctggtggtcgcccag
ttccgcagctacctggtgccgctggtgatcatggcgccgatcccgctgaccgtgatcggg
gtgatgccgggccacgcgctgctgggcgcgcagttcaccgcgacctcgatgatcggcatg
atcgcgctggccggcatcatcgtgcgcaattccatcctgctggtggacttcatcaaccac
gcactggcagctggacgcccgctcgagcaggccgtggtcgatgcctgcgcggtgcgcgcc
aagccgatcgtgttgaccggcgtggcggcgatgatgggcgcgttcttcatcctcgacgac
ccgatcttcaacggactggcggtgtcgctgatcttcggcatccttgtcagcaccgtcctc
accctggtggtgattccattgctgtattacaccttgatgcatcgcagccggccgcctttg
gcggagtcggcggaggagctggcatga
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