KEGG   Martelella sp. AD-3: AZF01_05835
Entry
AZF01_05835       CDS       T04332                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
maad  Martelella sp. AD-3
Pathway
maad03030  DNA replication
maad03410  Base excision repair
maad03420  Nucleotide excision repair
maad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:maad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AZF01_05835
   03410 Base excision repair
    AZF01_05835
   03420 Nucleotide excision repair
    AZF01_05835
   03430 Mismatch repair
    AZF01_05835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maad03032]
    AZF01_05835
   03400 DNA repair and recombination proteins [BR:maad03400]
    AZF01_05835
Enzymes [BR:maad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AZF01_05835
DNA replication proteins [BR:maad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AZF01_05835
DNA repair and recombination proteins [BR:maad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AZF01_05835
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZF01_05835
   MMR (mismatch excision repair)
    DNA ligase
     AZF01_05835
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AZF01_05835
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 RUBY_RBDX
Other DBs
NCBI-ProteinID: AMM86666
UniProt: A0A127CPA9
LinkDB
Position
1265019..1267172
AA seq 717 aa
MANDKVPTEKLTREEAAAELAFLAEEIARHDAAYHGKDAPEITDAEYDALKHRNDEIEAR
FPDLVREDSPSARVGSAPSEVFAPVTHSVPMLSLGNVFSDEDVQDFIASVYRFLGQLPDG
SIAFTAEPKIDGLSMSLRYENGRLVSGATRGDGTTGENVTANVRTIGEIPNRLPDGAPEI
VEVRGEIYMAKSDFAALNAALSEAGEKTYVNPRNTASGSLRQLDPKVTEKRKLKFFAYAW
GEMSEMPADTQMGMVGTFEKWGFPVNPLMKRLTSVDDLLAHYHEIGVKRGDLDYDIDGVV
YKVDRLDLQARLGFRSRSPRWATAHKFPAEQAITRLIAIDIQVGRTGALTPVARLEPITV
GGVVVTNATLHNEDYIAGKGSNGEPIREGRDIRVGDYVIVQRAGDVIPQIVDILPEKRPE
DATPYEFPDHCPVCGAHAVRDINEKSGKVDAVRRCTAGFSCRAQAVEHLKHFVSRNAFDI
EGLGSKQVDFFFEHDDPGLAIRTAPDIFTLERRQAEALTKLENFNGWGKTSVANLYQSIN
ERREIALPRFIFALGIRHVGETTAKLLARSYGSYAAFERAMRDAAAGEGDAWDDLNNIDG
IGTVVARALVDFFAEEQNVAVIARLLKEVTPLDDAQRIDTTSPVAGKTVVFTGSLEKMTR
DEAKAKAESLGAKVSGSVSKKTDIVVAGPGAGSKLKKAEELGVQTMDEDEWLALIGG
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggcgaatgacaaggttccgaccgagaagctgacccgggaagaggccgcggccgaactc
gcttttctggcggaggaaattgcccgccatgacgctgcctatcacggcaaggacgcgccc
gagatcacggacgccgaatatgacgcgctgaaacatcgcaatgatgaaatcgaggcgcgc
tttcccgatctcgtgcgtgaagacagcccctcggcccgcgtcggctccgcgccctcggag
gtcttcgcgcctgtcacccattccgtgccgatgctgtcgctcggcaacgtgttttccgac
gaggacgtgcaggacttcatcgcctcggtctatcgctttctcggccagttgccggacggc
tcgatcgcctttaccgccgagccgaagatcgacggtctgtcgatgtcgctgcgctatgag
aacggcaggctcgtctccggcgcgacgcgcggcgacggcaccacgggcgagaatgtgacg
gccaatgtccgtaccatcggcgaaattccaaaccgcctgccggacggcgcgccggagatt
gtcgaggtgcgcggcgagatatacatggcgaaaagcgattttgccgcgttgaacgcggcg
ctctccgaggcgggcgagaagacctatgtgaacccgcgcaacacggcgtccggttcgctg
cgccagcttgacccgaaggtgacggaaaagcgcaagctcaaattcttcgcctatgcctgg
ggcgagatgtcggagatgccggccgacacccagatgggcatggtcgggaccttcgagaaa
tggggtttcccggtcaacccgctgatgaagcggctcacctccgtcgatgacctgctggcg
cactatcacgagatcggcgtcaagcgcggggacctcgattatgatatcgacggcgtggtc
tacaaggtcgaccggctcgacctgcaggcgcggctcggtttccgctcgcgttcgccgcgc
tgggcgacggcgcataaattccccgccgagcaggcgatcacgcgactcatcgccatcgac
atccaggtcggccgcaccggcgcgctgacgccggtggccaggcttgagccgatcaccgtc
ggcggcgtcgtcgtcaccaatgcgacgctccacaacgaggactatatcgccggcaagggc
tcgaacggcgagccgatccgcgaggggcgcgatatccgcgtcggcgattacgtgatcgtc
cagcgcgccggcgacgtcatcccgcagatcgttgacatcctgccggaaaagcggccggag
gatgcgacgccttacgaattcccggatcactgcccggtttgcggcgcccatgcggtgcgc
gacatcaacgagaagagcggcaaggtggacgccgtgcgccgctgcacggccggtttttcc
tgccgggcgcaggccgtcgagcatctgaagcatttcgtttcgcgcaacgccttcgatatc
gaggggctcggcagcaagcaggtcgatttcttcttcgagcatgacgatccggggcttgcg
atccgcaccgcgcccgacatcttcacgctcgaaagacgtcaggccgaggcgctgacgaaa
ctcgagaatttcaacggatggggcaagacctcggtcgccaacctgtaccagtcgatcaat
gaacgccgcgaaatcgcgctgccgcgcttcatcttcgcgctcggcatccgccatgtcggc
gagacgaccgcgaagcttctggcccgctcctatggctcctatgccgctttcgaacgggcg
atgcgggatgcggcggcaggcgagggcgacgcctgggacgatctcaacaatatcgacggc
atcggaacggtcgtcgcccgcgcgcttgtcgatttcttcgccgaagagcagaatgtcgcc
gtcattgcccggctgctgaaggaagtgacgccgcttgacgatgcgcagaggattgacacg
accagtcccgtcgccggcaagacggtggtgtttaccggcagcctcgagaagatgacccgt
gacgaggccaaggcgaaagccgaaagcctcggggccaaggtttccgggtcggtttccaag
aagacggacatcgtcgtcgccggtcccggcgctggctcgaagctgaaaaaggcggaggaa
ctcggggttcagaccatggatgaggacgagtggctggcgctgatcggcgggtga

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