KEGG   PATHWAY: maca02010
Entry
maca02010                   Pathway                                
Name
ABC transporters - Marinobacter sp. CA1
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
maca02010  ABC transporters
maca02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Marinobacter sp. CA1 [GN:maca]
Gene
J2887_00125  znuB; zinc ABC transporter permease subunit ZnuB [KO:K09816]
J2887_00130  znuC; zinc ABC transporter ATP-binding protein ZnuC [KO:K09817] [EC:7.2.2.20]
J2887_00480  proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX [KO:K02002]
J2887_00485  proW; glycine betaine/L-proline ABC transporter permease ProW [KO:K02001]
J2887_00490  proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV [KO:K02000] [EC:7.6.2.9]
J2887_00750  potA; spermidine/putrescine ABC transporter ATP-binding protein PotA [KO:K11072] [EC:7.6.2.11]
J2887_00755  potB; spermidine/putrescine ABC transporter permease PotB [KO:K11071]
J2887_00760  potC; spermidine/putrescine ABC transporter permease PotC [KO:K11070]
J2887_00765  [KO:K11069]
J2887_00770  [KO:K11069]
J2887_00775  [KO:K11072] [EC:7.6.2.11]
J2887_00780  [KO:K11071]
J2887_00785  [KO:K11070]
J2887_01615  [KO:K07335]
J2887_02165  modC; molybdenum ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
J2887_02170  modB; molybdate ABC transporter permease subunit [KO:K02018]
J2887_02175  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
J2887_02190  [KO:K25286]
J2887_02195  [KO:K23188]
J2887_02200  [KO:K23187]
J2887_02205  [KO:K23186]
J2887_02310  [KO:K10829] [EC:7.2.2.16]
J2887_02330  [KO:K14698] [EC:7.-.-.-]
J2887_02335  [KO:K14699] [EC:7.-.-.-]
J2887_02450  [KO:K02040]
J2887_03120  [KO:K01996]
J2887_03125  livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG [KO:K01995]
J2887_03130  [KO:K01998]
J2887_03135  livH; high-affinity branched-chain amino acid ABC transporter permease LivH [KO:K01997]
J2887_03140  [KO:K01999]
J2887_03250  [KO:K10023]
J2887_03255  [KO:K10024]
J2887_03260  [KO:K10022]
J2887_03265  [KO:K10025] [EC:7.4.2.1]
J2887_03940  [KO:K02012]
J2887_03945  [KO:K02010] [EC:7.2.2.7]
J2887_03950  [KO:K02011]
J2887_04415  [KO:K19340]
J2887_04420  [KO:K19341]
J2887_04615  [KO:K05845]
J2887_04620  [KO:K05846]
J2887_04625  [KO:K05847] [EC:7.6.2.9]
J2887_04630  [KO:K05846]
J2887_04680  [KO:K10038] [EC:7.4.2.1]
J2887_04685  [KO:K10037]
J2887_04690  [KO:K10036]
J2887_04880  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
J2887_04885  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
J2887_04890  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
J2887_04895  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
J2887_04900  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
J2887_05035  choX; choline ABC transporter substrate-binding protein [KO:K02002]
J2887_05385  [KO:K01999]
J2887_05390  [KO:K01995]
J2887_05395  [KO:K01996]
J2887_05400  [KO:K01997]
J2887_05405  [KO:K01998]
J2887_05955  cysP; thiosulfate ABC transporter substrate-binding protein CysP [KO:K02048]
J2887_05960  cysT; sulfate/thiosulfate ABC transporter permease CysT [KO:K02046]
J2887_05965  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
J2887_05970  [KO:K02045] [EC:7.3.2.3]
J2887_07445  [KO:K01999]
J2887_08135  ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA [KO:K02193] [EC:7.6.2.5]
J2887_08140  ccmB; heme exporter protein CcmB [KO:K02194]
J2887_08145  [KO:K02195]
J2887_08150  ccmD; heme exporter protein CcmD [KO:K02196]
J2887_08485  [KO:K09815]
J2887_09090  [KO:K09808]
J2887_09095  [KO:K09810] [EC:7.6.2.-]
J2887_09120  msbA; lipid A export permease/ATP-binding protein MsbA [KO:K11085] [EC:7.5.2.6]
J2887_09240  [KO:K05685] [EC:7.6.2.-]
J2887_09665  [KO:K01999]
J2887_09760  [KO:K09816]
J2887_09765  [KO:K09817] [EC:7.2.2.20]
J2887_09770  [KO:K09815]
J2887_10215  [KO:K02044]
J2887_10220  [KO:K02041] [EC:7.3.2.2]
J2887_10330  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
J2887_10335  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
J2887_10670  [KO:K13893]
J2887_10675  [KO:K13894]
J2887_10680  [KO:K13895]
J2887_10685  [KO:K13896]
J2887_11705  [KO:K23188]
J2887_11710  [KO:K23187]
J2887_11715  [KO:K23186]
J2887_11720  fepB; Fe2+-enterobactin ABC transporter substrate-binding protein [KO:K23185]
J2887_12050  [KO:K09816]
J2887_12055  [KO:K09817] [EC:7.2.2.20]
J2887_12060  [KO:K09815]
J2887_12355  [KO:K02012]
J2887_12360  [KO:K02011]
J2887_12935  lptG; LPS export ABC transporter permease LptG [KO:K11720]
J2887_12940  lptF; LPS export ABC transporter permease LptF [KO:K07091]
J2887_13975  [KO:K09690]
J2887_13980  [KO:K09691] [EC:7.5.2.14]
J2887_14060  [KO:K12536]
J2887_14285  [KO:K07122]
J2887_14290  [KO:K07323]
J2887_14295  mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
J2887_14300  mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE [KO:K02066]
J2887_14305  [KO:K02065]
J2887_14330  lptB; LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
J2887_15320  [KO:K10829] [EC:7.2.2.16]
J2887_15325  [KO:K23227]
J2887_15330  fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB [KO:K23228]
J2887_16010  [KO:K02010] [EC:7.2.2.7]
J2887_17535  [KO:K14699] [EC:7.-.-.-]
J2887_17540  [KO:K14698] [EC:7.-.-.-]
J2887_18720  [KO:K02036] [EC:7.3.2.1]
J2887_18725  pstA; phosphate ABC transporter permease PstA [KO:K02038]
J2887_18730  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
J2887_18735  [KO:K02040]
J2887_19155  ftsX; permease-like cell division protein FtsX [KO:K09811]
J2887_19160  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
J2887_19430  [KO:K01995]
J2887_19435  [KO:K01996]
J2887_19440  [KO:K01999]
J2887_19445  [KO:K01997]
J2887_19450  [KO:K01998]
J2887_19545  [KO:K02073]
J2887_19550  [KO:K02072]
J2887_19555  [KO:K02071]
J2887_19665  [KO:K15576]
J2887_19670  [KO:K15577]
J2887_19675  [KO:K15578] [EC:7.3.2.4]
J2887_20220  [KO:K01999]
J2887_21280  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
J2887_21285  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
J2887_21290  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
J2887_21295  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
J2887_21300  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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