Marinobacter sp. CA1: J2887_13110
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Entry
J2887_13110 CDS
T10810
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
maca Marinobacter sp. CA1
Pathway
maca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2887_13110 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maca03400
]
J2887_13110 (nth)
Enzymes [BR:
maca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J2887_13110 (nth)
DNA repair and recombination proteins [BR:
maca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J2887_13110 (nth)
Prokaryotic type
J2887_13110 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UDL03672
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All DBs
Position
2878738..2879376
Genome browser
AA seq
212 aa
AA seq
DB search
MNKQKRTEIFTRLRDANPNPTTELNYSSPFELLIAVILSAQATDVGVNKATAKLYPVANT
PEAILALGVDGLKEYIKTIGLFNSKAENVIKTCRMLLEKHQGEVPDNREALEALPGVGRK
TANVVLNTAFGQPAMAVDTHIFRVSNRTGIAPGKNVLEVEKRLVRLVPKEFLLDAHHWLI
LHGRYTCTARKPKCGICMIEDLCEFKDKRDYL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaaaacgtactgaaatctttacccggttgcgggatgccaaccccaatccc
accaccgagctgaactacagcagcccgtttgagctgctgatcgccgtcatcctgtcggcg
caggccaccgatgtcggggtcaacaaggccacggccaagctttacccggtggccaatacc
ccggaggcaattctggccctgggggtggatgggctcaaggaatacatcaagaccatcggg
ctgttcaacagcaaggccgagaacgtcatcaagacctgccgcatgcttttggagaagcat
cagggtgaagtgccggacaaccgcgaggcgctggaagcgctgcccggtgttggccgcaag
accgccaacgtggtgctgaacaccgccttcggtcagcctgccatggcggttgatactcat
atattccgagtctcaaaccgtaccggtatagcgccgggcaagaacgtgctggaagtggag
aaacgcctggtccggctggtgcccaaagagttcctgctggatgctcaccactggctgatc
ctccatggccgctacacctgtaccgcccgcaaaccgaagtgcggcatctgcatgatcgag
gatctgtgtgagttcaaggacaagcgggattacctgtag
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