Mya arenaria (softshell): 128207011
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Entry
128207011 CDS
T09995
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128207011
03400 DNA repair and recombination proteins [BR:
maea03400
]
128207011
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128207011
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
128207011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
128207011
NCBI-ProteinID:
XP_052765757
LinkDB
All DBs
Position
10:8703481..8803540
Genome browser
AA seq
2047 aa
AA seq
DB search
MDVMAEFLTKMAAPSQAKDDGFIFVYDRREKDAPEKTISTQKILSFSDLKAKIIEEFGLK
KTDKFVISTTNREEVNDNDSWDVVGSGETLYLLKNLDQELCAPARERVNYLPHYDTIVKG
GMYEYYASEGQNPLPYAFAELIDNALAATRNNEGPRNIEIRVNLDESTIYVLDNGKGMTS
RQLNNWAIYRLSKFIRKDKRSKVNLDETVEEEESFVEQDAPKSLNSDISYFGVGGKQAVF
FIGNATRMISRPVGSKDVHELTISREEFEKKEKNHEEIYSGFIRNRKPGDAAHVSKEDET
LCSLIGEEPGRDHFTAVIVQGVSKEHMLYLKEKLKEWTRQLAHIYHYYLHGPSGNVEHAD
ENTRAPSPFKNIDIEVKLYQTRNPVPKTINLRDIDNDMQTQFVRGAASTFEFNAVIEGAK
VEGVLRYHPFLYDRETYPMDPYEKPEMTLEDEHGYAVSEVPARGRRPIFECFWNGRLIPY
TMIDSFEWCNPTKKSKNVPSECCNRVSGVLWTDDNFQVSTNKLTFIDLELKLRDKLASFC
RVLNGQEKRTSIEKEFMGWLRECHEQFDKQIHFTEYQGQIVRLDLPKNRQTPWAAYKQVE
WDGKVYKAGQMVRIVRTLPFFLGTVNRILLYGDHEGDTYATGGDLEVIQEPRSLYNEVKI
VPLSKLDRTVNNQMVKKFIEDEEAKLPSELDISFPEGNRVVNNEKRKAGKPIGDIKIEII
NKKGDKVKSLPGKEQANKKLLVELKVIWHAAGGDQTIVSHISQHGKNWPYWFRKMENVNY
LGNYTLTLQVVLNESGENTFAGRELPGRKYKFQVVEGEAERFSVGHLEGPFRVGVPFNIP
LELQDAYGNPAKIDMGKVDVKSITPVLEASGLELAYGGTSTKGHTLTIKDVEAQGQVQGN
TGKNFSLTITVPELNKFAQVLKIRLLPGPASILSVSPEEELSVVNGSAPIYRVQIQDVAG
NPTILEGRQSIVCKLSGAPGLPSYSLDSLSINGGNLTGESIFLKKIKSNTKLTAKFDVQG
SKTIKPVERKMVVVPSGKICDMKVCYPDPDTKKQITITNGMEIIIRAGETLEVLTYKLYD
EGEREVDITEKVASKIKINWLAKLNKDILMKGQLPGIKATNSVLELKYCQVSVAESSGLE
LGFVLKTTAWEPHGLNCTLTGSNKISIGQPLAGELLVKIIDKFGNKIDMDGKGFVNELAA
HISGEGLKKELCKITYDKQLMSAIIKGIVFEGGTIGKKELQIQWKSLKDYVRLEMVAGPP
AKIKFLHYNPDEELVLYNESQFPKPIVVQLLDEGENPARVADIKMQLAKDTKLKLIPTVQ
PTKTNKEGVADFGMYTISCSQGKYEVQPKAFISTSFVLSGPKLKISIQPDPTRPASLNVV
YNTKLTLVVGQSLPEYTVTVVSEDGSPLTTAKCSHVSLKLWKSDGYDSNSLPSRTLSHNP
ETTKKSEAGVFHFRNIDTPEESGPYNIMFVFYDGKHQLFSSVIHTKIEPGVPVKLFALEE
LGTATISNSKNVNTRCIVRNLKLELRDKFNNHVTRGMNGCVNVQVSCPTDEKELPMLHGT
SSKSRVLQFTLAGGSCTIQMVAIQENSPGKDGCQYELNCSVVWCDPIPVKTTLEPLCIPF
LFYNDAKKQTEMAALTKERDSLVNAIKVYRSLFETSEQLIQELKISVKEMKSDENRYREE
LRRQKVPIASTNSVEGVEKLLKEYNEKKLEESSRKRRLCGLQTIAANDPDVLGKIGHLAL
ISDDDAARVLSWHMSSDMDCVVTLTTKKAKEIYSMTSGRQQVLPLDSIFKKSLTEWNKPL
PHVKYKPNWRPAGNPVFARNLLTFEKNQDMCKTVFSMLLGDTLWIDTLDQANNYRIELVK
YTNCPTILTREGDRIRSNGKFGGLMNKAPPVEKLRGAVFGAQLPEGYHKVCSVIDTLTRL
HSALQTHNTAQEELDDQLAVIQAPEMQAKYEECREVEKQLKDLEKRIGMTSPHRTVTPSL
LPKIPKRTPDREEENNRSVKRLRGSPASSDSNSVTSVTPSLLTPTRQSRRLAAQSPADEG
RKKLKKS
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atggacgttatggctgagtttctgacaaaaatggcggcaccaagccaagcaaaagatgat
ggatttatttttgtttacgatcgaagggaaaaagatgcacctgaaaagacaataagcacg
cagaagatattatcattttcggatttgaaagctaaaattattgaggagtttggattgaag
aagacggacaagtttgtcatatcaaccactaacagagaggaagtcaatgacaatgactcg
tgggacgttgtgggttcgggcgagacactgtaccttctcaaaaacctggatcaagagtta
tgtgcccctgcccgggaacgagtcaactacctacctcactacgacaccatcgtcaagggc
ggcatgtacgaatactatgcctctgaaggacagaacccgctaccgtacgcttttgccgag
ttgatagacaatgccctggctgccaccaggaataatgaggggcccaggaacatcgaaatc
agagtgaacctagatgagtctacaatctacgtgctggacaatgggaagggcatgacgtca
cgccagctcaacaactgggccatctacaggctctccaagttcatacgcaaggacaaacga
tctaaagtaaaccttgacgagaccgtcgaagaagaggaatcgtttgtcgaacaagatgca
cccaagtccctcaacagcgatatatcatactttggtgtgggcgggaaacaggccgtgttc
ttcattggcaatgctacacggatgatatcccgtccagttggctcaaaggacgtgcacgag
ttgaccatctcaagggaggagttcgagaagaaggagaagaaccatgaggagatctacagt
ggcttcatccgcaacagaaagccgggtgatgcggctcatgtttccaaagaagacgagact
ctgtgtagcctgataggagaggagcccggccgggatcatttcactgccgtcatagtacag
ggcgtgagcaaggagcacatgctttacctgaaggagaaactcaaagagtggacacgacaa
ctcgcccacatctaccactactacttacatggcccaagtggcaatgtagagcatgctgat
gaaaacaccagggcaccatcgccattcaaaaacattgacattgaggtcaaattgtatcaa
actcgcaacccagttcccaaaaccatcaacctccgggacatagataacgacatgcagacc
cagtttgttcgcggggctgcaagtacatttgaatttaacgccgtcatcgagggggcgaag
gtggagggggtgttgaggtatcatcccttcttgtacgacagggagacataccccatggat
ccatatgagaaacctgaaatgactctagaagatgaacatggttatgctgtgagtgaggtg
ccagccagggggaggagacccatctttgagtgcttctggaatggccgcctcataccctat
accatgattgacagctttgagtggtgcaacccaacaaaaaaatccaagaatgtcccttct
gaatgctgtaacagggtgtctggtgtgttatggacggatgacaatttccaagtgagcacc
aacaagttgaccttcattgaccttgaactcaaactgagggataaactggccagcttctgc
agggttcttaatggacaggaaaagcgcacctctatagagaaggagtttatgggctggttg
agggagtgtcatgagcagtttgacaagcagatccacttcactgagtaccagggacaaatc
gtgaggctcgacctgcccaagaacaggcagactccgtgggctgcgtataaacaggtcgaa
tgggacgggaaggtctacaaggctggacagatggtgcgtatagtgcggaccctgccgttc
ttcctgggaactgtcaaccggatcctgctttacggggaccatgaaggagacacgtatgcc
actgggggtgatcttgaggtcatacaggagccgaggtcgctgtacaacgaggtgaagata
gttcccctctcaaagctagacaggacagtgaacaaccagatggtgaagaagttcatcgag
gacgaggaggcaaagctgcccagtgagctggatatttcattccctgagggaaacagggtg
gtcaacaatgagaaaaggaaggccggtaaacccataggtgacatcaagatagagatcatc
aacaagaaaggcgacaaggtgaaaagtctgccaggaaaggaacaggctaacaagaaactc
ctggtcgagttgaaagtcatctggcatgcggcgggaggtgaccagactatagtatctcac
atcagtcagcatggcaagaactggccgtactggttcaggaagatggagaatgtgaactac
cttggaaactacacactcaccctgcaggtggttcttaacgagagtggggaaaacacattt
gccggcagggagcttcctggacggaaatacaagttccaggttgtagagggagaggctgag
aggttctctgtaggtcatttggaagggccatttagggtcggagtgcccttcaatattccc
ttagaactgcaagatgcgtacggtaatccggccaagattgatatgggcaaggtggatgtg
aagtcaataacccctgttctagaagcaagtggcctggaactggcttatgggggcacgtca
accaagggtcacacactgaccatcaaggatgttgaggctcaaggtcaagtacagggaaac
actggcaagaactttagtttgacaatcacagtgccagagttgaacaaatttgcccaggtg
ttgaaaatcagacttctaccaggtcctgccagtattctaagtgtaagccctgaagaggag
ctatcagtggtgaatgggtcggccccgatataccgcgtacagattcaggatgtggcgggt
aaccctaccatactggagggcagacagagcattgtgtgtaagttgtcaggtgctccgggc
ctgcccagctactccctggacagtctcagtatcaacggggggaacctcacaggggagtcg
atttttctcaaaaagatcaagtcaaataccaagcttacagcaaaattcgatgttcaggga
tctaagaccataaagcctgttgaacgtaagatggtggttgtcccgagtggtaagatatgt
gacatgaaagtgtgctaccccgaccccgacaccaagaaacagataaccatcaccaacggc
atggagattatcataagggctggagaaaccctggaggtgcttacgtataagctgtatgat
gagggagagagagaggtggacatcactgaaaaggttgcctctaagataaagattaattgg
ctagccaagctgaacaaggacatactgatgaagggccagttaccaggaatcaaggccact
aactctgtattggagctcaagtactgtcaggtgtctgtggcagaaagctctggccttgag
ctgggatttgtactcaagacaacagcgtgggaaccacatggccttaactgcacattgact
ggctccaacaagatcagtattggccagcctttggccggtgaacttctggttaagattatt
gacaagtttggcaataaaattgatatggatggtaaaggttttgtgaatgagttagcggcc
cacatcagtggagaggggcttaagaaggagctgtgtaagattacatatgataagcaactg
atgtcagcaataattaaaggcatagtgtttgaaggtggaacaattggtaaaaaagagctt
cagattcagtggaagagcctcaaggattatgtccgcctagaaatggtggcagggcctccc
gcaaagatcaagttcctacactataaccctgatgaggagctagtgttatacaacgaaagc
cagttcccaaagccgattgttgtacagttactagatgagggtgaaaacccggcccgggtc
gccgacataaagatgcagcttgctaaggacaccaaactaaagttgattcccaccgttcaa
cctaccaagaccaacaaggagggcgttgcagactttggcatgtacaccatctcctgctca
cagggaaaatatgaggtgcagccgaaggcgttcatctctaccagttttgtcctgtctggc
cctaaactgaagatatccatccagcctgaccccacacgcccagccagtctcaatgtggtc
tataacaccaagttgactctcgtagttggacagtctttgcctgagtacacagtgacagtg
gtatcagaggatggtagtccgctgaccacggccaagtgttcccatgtgtccctcaaactc
tggaagtctgatggctatgatagcaacagtctgcccagcaggaccctgtcacacaaccct
gaaacaacaaagaagtctgaggcaggagtcttccattttaggaacatcgacactccggag
gagtcaggcccttacaacatcatgtttgtcttctatgacggcaaacatcaactcttcagc
agtgtgatccacacaaagatagagccaggagttcctgtgaagctgtttgccctggaagag
ctgggtacagccaccatctccaacagtaagaacgtcaacaccaggtgcatcgtcagaaac
cttaaactggaactcagggacaagtttaacaaccatgtgacccggggcatgaacggctgt
gtgaacgtccaagtgtcgtgtcccacagatgagaaagagctcccaatgttacatgggaca
agctccaagtctcgagtgctccagtttaccctggcagggggcagctgtactatacagatg
gtagctatccaggagaacagtcctgggaaggatggctgtcagtatgaactcaactgtagc
gtcgtgtggtgtgatcctatacctgttaagactacgctggaaccactatgtatacccttc
ctcttctataacgatgcgaagaagcagacggagatggctgcactgaccaaggagagagat
agcctcgttaacgccatcaaggtctacaggtccctgtttgagacatcagaacagcttata
caggaacttaaaatctcagtgaaggagatgaagtcagatgagaacagatatagagaggag
ttgaggagacagaaggtccccatagcgagcactaattctgttgaaggtgttgaaaagctg
ctgaaggagtataatgagaagaagttggaggagagtagccggaaacgtcgcctgtgtggg
ctacagaccattgccgctaatgatccagatgtactcggcaagataggtcacctggcgttg
atatcagacgatgatgcggcccgagtactctcctggcacatgtcttccgacatggactgt
gtcgtcactcttaccactaaaaaggctaaggagatctacagcatgacgagtggtcgccag
caggtgctgcctctggactccatcttcaagaagagtctcacagagtggaacaaaccgctg
cctcatgtcaagtacaagcccaactggcgcccagcaggaaaccccgtgtttgccaggaac
ctgctcacatttgagaagaaccaggacatgtgtaaaactgtgttctcaatgctgctagga
gacacattgtggattgatacccttgaccaggctaacaactacagaatagagctggtgaag
tacaccaactgcccaaccatcctgacgagagagggtgaccgtatacgtagtaatgggaag
ttcgggggtctcatgaacaaggcccctcctgttgagaaattgagaggtgccgtgtttggg
gcacagttgcctgagggataccataaagtctgctctgtcattgataccctgacacggcta
cattcagctctacagacccacaacacagcccaggaagagcttgatgaccagctggccgtt
atccaggctcctgagatgcaggccaagtatgaagaatgtcgggaggttgagaaacaactc
aaggatcttgagaaacgtataggtatgacctcaccacacagaactgtcacaccgagcctg
ctaccgaagataccaaaacgtacgccagacagagaagaagagaacaatcgaagtgttaaa
cgtcttcggggctccccagcctcctcagacagtaacagtgtaacatcggtcaccccctcc
ctcctcaccccgacacgtcaaagtcgacgtcttgctgcacaaagtcctgctgatgaggga
aggaagaagttgaaaaagtcatga
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