Mya arenaria (softshell): 128210198
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Entry
128210198 CDS
T09995
Name
(RefSeq) nuclear hormone receptor HR96-like isoform X1
KO
K08536
liver X receptor alpha
Organism
maea
Mya arenaria (softshell)
Pathway
maea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128210198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128210198
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128210198
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128210198
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
128210198
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
128210198
NCBI-ProteinID:
XP_052770338
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Position
12:complement(33167162..33331354)
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AA seq
501 aa
AA seq
DB search
MMFSDYGGRPGPPSQWNQPPHPSMYGGPPPPHYPQGSPGAIMGPMGYPGGPGRRVQDPTS
EVFTCLFGDLFVKCFEDSNSNGYSEGIPNPYRPMDLRPDYNGMEPLHKSRKNKEDKFCGV
CGDRALGYNFDAISCESCKAFFRRNAPKGLDYFKCPYEEKCKMDVSNRRFCKRCRLRKCF
EIGMRKEYILTDEEKMRKRQRIDDNRRMRDLEKSMAQSGVVSPNLGGMSPAKLRSLEPEE
EAAINEIVRAYRASLEIPIESKVPRDNANFAALVNIAEVSVRRVVDMAKKLKAFKALSQT
DQIGLLKGGSIELLILRSVISFDKENNYFLDPYDKDSLALTQDQFKEGIEKSDMGMPGMN
IPGGPTGLFDDHMKFVKSLAIDLKADETMLILLLMLSLFSPDRPNVTDKVYISAEQDKYA
LLLQRYLESRYPYQVARSVFPRLLMKLTDIRNLNEEHSQVLLKLNPEGLQPLMKEVMDLH
LKKKGTDTDTDSDASSSIASP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttctgattacggtggtcgtcctggaccgccctcgcagtggaatcagcctccc
cacccctcaatgtacgggggtcctccccctccccactacccccaggggtcaccgggagcc
attatggggcccatggggtatcctgggggacctggacgaagggtccaggaccccaccagc
gaggtttttacctgcctgtttggggatctgttcgtgaaatgttttgaggacagtaacagt
aatggttactctgagggcatcccgaatccctatcgccccatggatctccggccagactat
aacggcatggagccgttacacaagagtcgcaaaaacaaggaagacaaattttgcggcgtg
tgcggggatcgggccctcgggtacaactttgatgccatatcgtgcgaatcatgtaaagcg
ttcttcagacgaaatgcaccaaaaggattggattacttcaagtgcccttatgaagagaaa
tgtaagatggacgtctcaaatcgccgattctgcaaaagatgtcgactacgcaagtgcttc
gaaatcggcatgcgcaaagagtacattctcacagacgaagaaaagatgaggaagcgacaa
cgaattgatgataacaggaggatgcgcgatctcgagaagagtatggcgcagtcaggcgtt
gtttccccaaatcttggtggtatgtcacccgcgaaactccgctcgcttgagcccgaagag
gaagctgccataaacgagatcgtcagggcttatcgtgcctccctggaaatacccatcgag
tctaaggtgccgagagataatgccaattttgccgcactagtgaacattgctgaagtcagt
gtgcgtcgtgttgtagatatggccaaaaagttgaaagctttcaaagctttatctcagact
gaccaaatcggtcttctgaagggaggaagtatagagttgctcattcttagatctgtaatt
tcattcgataaagaaaataattacttcttagatccatatgacaaggactcgctagcgtta
acgcaggaccagttcaaggaaggaatcgagaagagcgatatggggatgccgggtatgaat
attcccggtgggccgacgggtttgttcgacgatcacatgaagttcgtaaagtcacttgcg
attgacctgaaggccgatgaaaccatgttgatattactgctcatgctttcgcttttctcc
cctgatcggccaaacgtaaccgacaaagtctacatctcagcagagcaggacaagtatgca
ctacttcttcagcgatatcttgaatccaggtatccgtatcaagttgctcgatcagtgttc
cctcgccttcttatgaagcttacggacattcgtaacttgaacgaggagcactcccaagtg
ttgctgaagctgaacccagaaggactccagccgctaatgaaggaagtcatggacttgcat
ctgaaaaagaaaggcacagacaccgatacggacagtgacgcatcatcgtcaatagcctcc
ccttga
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