Mya arenaria (softshell): 128213607
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Entry
128213607 CDS
T09995
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128213607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128213607
Membrane trafficking [BR:
maea04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128213607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
128213607
NCBI-ProteinID:
XP_052775468
LinkDB
All DBs
Position
13:14234930..14249273
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AA seq
477 aa
AA seq
DB search
MSSGNTDGVLRHDAADHGVLEIKTEIDNPAVTPSSPSSKYSKSELIRINLDHCPFQGLAL
SFWDNILGPRTRHVWNISNEKPLKSDLLSLITSQVLSCEICRDPFKSDIDFKFYNLPYKD
VVVPAFVFSAKGSNGISVHSLYVVIPISGLKFYLKIHEVLQSCLQRLIRKLRVILDKNPF
EMCMSVFGKYLSDCVQVLSRLNSSSLARNVSLLDTAFSPGHVLERDFLARCVASHLMTFG
RSLVIGETAERINLVLNTLSMFNSESERHCSLPYCVKDPQLYHHDLYLQGLVKEDKHSVL
PMTEITASRYPTTIIDLTSREVKQTQSYSEHVLHRFETLKNELICLQYGHFDELVVLDQD
LHSSSAYPDTLVQILVKELFELRSVCWVREAFISQFVRMLNKRAQCLIAAVKAEGDESHG
TVKPQTLKKIRQDLNLHAEGDFCIVLATAEKLKPGIYCLLKPHRRNEREFNKAVEIL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggaaatacagatggagtgttaagacatgatgcagctgatcatggtgttctg
gagattaagacagaaatcgacaaccctgctgtaacaccatccagtcctagctctaaatat
tcaaaatctgagcttatcaggattaacttggatcattgtccattccaaggacttgcattg
tcattctgggacaacattcttggccctcgcactagacatgtatggaatataagtaatgaa
aagcctcttaagtcagacttgctttcactcattacaagtcaggttctcagctgtgagatt
tgccgagacccgttcaagagtgatattgactttaagttttataaccttccttataaggat
gtggttgttcctgcttttgtgttctcagcaaagggatcaaatgggatatctgttcattcc
ctgtatgtcgtcattccaatatcggggctcaagttttaccttaaaatacatgaggttctg
cagagctgcttacagaggctgatcaggaaattacgggtcattcttgacaagaacccattt
gagatgtgtatgagtgtgttcggcaagtacctctccgactgtgttcaggtcctgtctcga
ctaaacagctcttcgctagccaggaatgtctcgcttttagacacggccttcagccctggt
catgtcctggagcgtgactttttggcccggtgtgtagcctcccatctcatgacatttgga
aggagtctcgtcattggagaaactgcggagaggatcaatttggttttaaacaccctgtca
atgttcaacagtgagagtgagcggcactgctccctgccatactgtgtgaaggacccgcag
ctttatcaccacgacctctacttacaggggcttgtcaaggaggacaagcattcggtgttg
cctatgacagagattactgcaagtcgctacccaactaccatcatagatctgacgagccgt
gaggtgaaacagacccagtcttacagtgaacatgtccttcacaggtttgagaccttgaag
aatgagctgatatgtctgcagtatggccactttgatgaattagttgtgttagaccaggac
ttgcattccagctctgcgtatcctgacaccctggtgcaaattttggtgaaagagctgttt
gagttacgttctgtgtgctgggtgcgggaagcgtttatctcccagtttgtacgtatgcta
aacaagagggcccagtgtctcattgctgcggtcaaggctgagggtgatgagagccatggt
acagttaaaccacagacgctaaagaagatacgccaggatttaaacctgcacgcagagggc
gacttctgtattgtcttggcaaccgcagaaaaactgaaacctggaatctactgtctcctg
aaaccacacaggagaaacgagagagagttcaataaagcagtggagattttgtag
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