Mya arenaria (softshell): 128213804
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Entry
128213804 CDS
T09995
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
maea04140
Autophagy - animal
maea04144
Endocytosis
maea04517
IgSF CAM signaling
maea04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128213804
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128213804
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128213804
04140 Autophagy - animal
128213804
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128213804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128213804
04121 Ubiquitin system [BR:
maea04121
]
128213804
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128213804
Membrane trafficking [BR:
maea04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128213804
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128213804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
MATH_2
TRAF-mep_MATH
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-C3HC4_4
TRAF3_RING
RING_XB3-XBAT31
Sina_ZnF
zf-RING_5
ELG1_middle
HVO_2901
Motif
Other DBs
NCBI-GeneID:
128213804
NCBI-ProteinID:
XP_052775824
LinkDB
All DBs
Position
2:complement(23288344..23293341)
Genome browser
AA seq
406 aa
AA seq
DB search
MASSQSDTDGVLGYAAIFDGEADRKYLCPICLVVMRDAVQTSCGHRFCRVCILKVAGGNP
LCKCPVDNTYFDFDDEMFPDIAIQREILSLPVKCNQVAEGCPWVGELRNLETHLEGCDYI
EIECEFGCSRGRLLRRDIDLHKETCDKRPTICTHCSDQMPYSEITRHQLLECDKLPLNCT
QCGRAGIMRGRIQCHLDNDCAHAIVNCQFWKYGCKVKEKRMNIFEHDTQSASRHIKLLEK
HVSMQDQTIEDLKNRMKSICRTAIDTNFEMSGRLQWKIEVVPGENKYRSPSFYTGYPGYK
LHLSLEKKGHIEQDQAYASLFVILESGQFDNDLFFPLNAVCKVKVLSEFVEPVETVIHCE
NIPRSYYEREISNCQRGRLRFMHTNKLFSADYCTNDCIYMDIKMKM
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccagctctcagtctgacactgatggtgtactaggttacgcagcaatatttgatggg
gaagcagacaggaagtatctatgtccaatatgcctcgtcgtgatgcgggatgccgtgcag
acatcttgtggtcatcgattctgcagggtttgcatccttaaagttgctggtggcaatccc
ctctgcaaatgtccagttgacaacacctactttgactttgatgatgagatgtttcctgac
attgccatacaacgagagattctgtcgttgccggtcaagtgtaaccaggtggctgaagga
tgcccctgggtaggggaattgagaaatctcgagacccaccttgaaggttgtgactacatt
gagatagagtgtgagtttggctgttcccgaggacgcttgctgcggagggacatagatctg
cacaaggagacgtgcgacaagcgtcccaccatatgtacacattgcagtgatcagatgcca
tacagtgaaatcacacgtcaccagttattggagtgtgacaagctgccattgaattgtacg
cagtgcggtcgagcggggatcatgcggggtcgtatacagtgtcaccttgacaacgactgc
gctcatgccattgttaattgtcagttctggaagtatggctgcaaggtcaaggagaaacga
atgaacatatttgaacatgacacacagtcggccagtaggcatatcaaactcctggaaaag
catgtaagcatgcaagaccaaactatcgaggacctgaagaaccgtatgaagtccatctgc
agaaccgctatcgatacaaattttgagatgtcaggtcgattgcagtggaaaatcgaggtt
gtacctggggaaaacaagtatcgaagtccttcattttataccggttaccctggatacaag
cttcacctgtctttggaaaagaagggtcacattgaacaagatcaggcctatgcatcgctg
ttcgtaattcttgaatcagggcagtttgataatgatctgtttttcccgcttaatgcggtt
tgcaaggtaaaagtgctgagcgaatttgtcgagcctgtcgaaaccgtgattcattgtgaa
aacatccccaggagctattatgaacgagagatctctaactgccagcgaggacgccttagg
tttatgcacactaataaactattcagtgccgactattgtaccaatgattgtatttacatg
gacattaaaatgaaaatgtga
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