Mya arenaria (softshell): 128213900
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Entry
128213900 CDS
T09995
Name
(RefSeq) TNF receptor-associated factor 6-A-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
maea04140
Autophagy - animal
maea04144
Endocytosis
maea04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128213900
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128213900
04140 Autophagy - animal
128213900
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128213900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128213900
04121 Ubiquitin system [BR:
maea04121
]
128213900
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128213900
Membrane trafficking [BR:
maea04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128213900
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128213900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
TRAF-mep_MATH
zf-C3HC4
zf-C3HC4_2
MATH_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-C3HC4_4
TRAF3_RING
RING_XB3-XBAT31
zf-RING_5
DUF5057
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
128213900
NCBI-ProteinID:
XP_052775978
LinkDB
All DBs
Position
2:complement(24459849..24466159)
Genome browser
AA seq
357 aa
AA seq
DB search
MASSQSDTDGVLGYAAIFDGEADRKYLCPICLVVMRDAVQTSCGHRFCRVCILKVAGGNP
LCKCPVDNTYFDFDDEMFPDIAIQREILSLPVKCNQVAEGCPWVGELRNLETHLEGCDYI
EIECEFGCSRGRLLRRDVDLHKETCDKRPTICTHCSDQMPYSEITRHQLLECDKLPLNCT
QCGRAGIMRGRIQCHLDNDCAHAIVNCQFWKYGCKVKEKRMNIFEHDTQSASRHIKLLEK
HVSMQDQTIEDLKNRMKSICRTAIDTNFEMSLKISKLQDCCYMGRLQWKIEVVPGENKYR
SPSFYTGYPGYKLHLSLEKKGHIEQDQAYASLFVILESGQFDNDLFFPLNAVCKDPT
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggccagctctcagtctgacacggatggtgtactaggttacgcagcaatatttgatggg
gaagcagacaggaagtatctatgtccaatatgcctcgtcgtgatgcgggatgccgtgcag
acatcttgtggtcatcgattctgcagggtttgcatccttaaagttgctggtggcaatccc
ctctgcaaatgtccagttgacaacacctactttgactttgatgatgagatgtttcctgac
attgccatacaacgagagattttgtcgttgccggtcaagtgtaaccaggtggctgaagga
tgcccctgggtaggggaattgagaaatctcgagacccaccttgaaggttgtgactacatt
gagatagagtgtgagtttggctgttcccgaggacgcttgctgcggagggacgtagatctg
cacaaggagacgtgcgacaagcgtcccaccatatgtacacattgcagtgatcagatgcca
tacagtgaaatcacacgtcaccagttattggagtgtgacaagctgccattgaattgtacg
cagtgcggtcgagcggggatcatgcggggtcgtatacagtgtcaccttgacaacgactgc
gctcatgccattgttaattgtcagttctggaagtatggctgcaaggtcaaggagaaacga
atgaacatatttgaacatgacacacagtcggccagtaggcatatcaaactcctggaaaag
catgtaagcatgcaagaccaaactatcgaggacctgaagaaccgtatgaagtccatctgc
agaaccgctatcgatacaaattttgagatgtcactcaaaatatcaaagctacaggattgc
tgctatatgggtcgattgcagtggaaaatcgaggttgtacctggggaaaacaagtatcga
agtccttcattttataccggttaccctggatacaagcttcacctgtctttggaaaagaag
ggtcacattgaacaagatcaggcctatgcatcgctgttcgtaattcttgaatcagggcag
tttgataatgatctgtttttcccgcttaatgcggtttgcaaggatccaacatga
DBGET
integrated database retrieval system
