KEGG   Mya arenaria (softshell): 128217821
Entry
128217821         CDS       T09995                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
maea  Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:maea00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:maea03037]
    128217821
Cilium and associated proteins [BR:maea03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   128217821
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40 Zn_ribbon_IFT122 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Zn_ribbon_IFT122_C EIF3I WDR55 TPR_IF140-IFT172 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st TPR_GEMI5 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st TPR_IFT80_172 Beta-prop_IFT140_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st PEP5_VPS11_N eIF2A WDR90_beta-prop_4th Beta-prop_WDR75_1st TPR_12 Beta-prop_NWD2_C Beta-prop_SPT8 zf-RING_2
Other DBs
NCBI-GeneID: 128217821
NCBI-ProteinID: XP_052781183
LinkDB
Position
14:complement(33177005..33200609)
AA seq 1189 aa
MRAVPTWVDKVHDRDKQEQCIWDLCFKPDGSQLIVAAGNRVLVYDTNDGTLIQPLKGHKE
AVHCVCYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCMCYNPVTHALASCAVT
DFGLWSPEQKSVSKHKVSSRVTCCSWTNDGQYLALGLYNGLISIRNKNGEEKVKIERPGA
NISPIWSLQWNPSKDEAYDVLSVADWGQRLSFYQLSGKQIGKDRQLGYDPCFVKWFSRGE
YVVVGGANKQCNLHTKEGVKLGTIGDQQSWVWTAAIKPDSNYVAVGCQDGTIAYYQLIFS
TVHGLYKDRYAYRDNMTDVIIQHLITDQKVRIKCRDLVKKIAIYRHRLAVQLPDKIVVYE
LYSDDAADMHYRVKDKINRKFECNLLVVCSTNIILCQDKRLQCFTFQGVKEKEWIMESLI
RYIKVIGGPQGREGLLVGLKNGQILKLFVDNPFPIALLKQSTSVRCLDMSASRNRLAVVD
EHNTCLVYDINTKELLFQEPNANSVAWNTHYEDMLCFSGNGLLNIKASNFPVHQQKLQGF
VVGFSGSKIFCLHIYSMSAVDVPQSAPMYQYLEKKLFKDAYRVACLGVTDGDWEALAHEA
LEGLDFDTAKKAFIRIRDLRYLELIHNIEERKKRGETDNMVFLGDVYGYQGKFHEAAKLY
KKSGQEHKAMNMYTDLRMFDYAKEFIGSGDPMDKKMLITKQADWAKSSNEPKAAAEMYIS
AGEFVKAIEIIGDHGWAEMLIDLARKLDKADRESLSRCAHHLARLEQYGYAAEVYSKMGD
HKALIMLHVDAKHWEDAFTLVEKHQEYREEVYVPYAQWLAENDRFEEAQQAFHKAGLQAE
AVKVLEQLTHNAVIESRFNDAGYYFWKLSIQCLDIARDEPDKMEEMLPKFYDFQRKADMY
YAYHSIQRYTDEPFTSHLPEALFNISRYLLHQMNNDIPHGISKAGTLYALAKQSKNLGAF
KLARFAYDKLQAAKVPGRFQEAVDLGSIQIRSKPFLDGEELLPMCYRCSTTNPLLNPGGG
KCVNCSQPFVNSFVSFEVLPLVEFVLEDGITDEEAITILDLSVPIKKDEDRKWNESRAGN
MQSLRLGDEPEDEEEQEDPFSNKLLTFDQGDTEFRPVIVNRNVLKTLSRADVYIRKWPRP
LRHQYFRSLLPDVSITMCPCCQKLFHTDDFELQYLQNGHCPFCRHKQES
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgagagctgtaccaacttgggtggacaaagtccatgatagggacaagcaggagcagtgc
atctgggacctgtgctttaaacctgatggaagtcaattgattgtagcagctggcaataga
gtgttggtatacgacacaaatgatgggacactcatacagccactgaaaggtcacaaggag
gctgtacactgtgtatgctatgcgaaggatggaaaacggtttgcctcgggctcagctgac
aaaagtgtcatcatctggaccagcaaacttgaaggcattttgaaatacacgcataatgat
gctatccagtgtatgtgctataatccagtcacccatgctctggcaagttgtgctgttaca
gattttgggttatggtccccggagcagaaatcagtgtcgaaacacaaagtgagcagccgt
gtgacatgctgtagttggaccaatgatggacaataccttgccctgggactctacaatggc
cttatatccatcagaaacaagaatggagaggagaaggtaaagatagagcgaccaggagcc
aatatttcacccatctggtccttgcagtggaacccatccaaagatgaagcatatgatgtt
ctgtcagttgcggactgggggcaaaggctttctttctaccagctctctgggaaacagatt
gggaaggaccgtcagcttggatatgacccatgtttcgtgaagtggttttcccgtggggag
tatgtggttgtgggcggggccaacaagcagtgtaaccttcacacaaaggaaggggtcaaa
ctggggacaattggggaccagcagtcatgggtgtggacagctgccatcaaacctgactcc
aactacgtggcggttggatgccaggatggtacaatagcgtactaccagctgatattcagc
accgtacatggtctgtacaaggacagatacgcttacagggacaacatgacagatgtcatt
atacagcatctcatcacagatcagaaagtgagaattaaatgccgagatctggtgaagaaa
atagctatatacaggcacagattggcagttcagctcccagacaagatagttgtatacgag
ctgtactcagacgatgctgctgacatgcactatcgcgtcaaggacaaaatcaacaggaag
tttgagtgtaacctgcttgttgtctgctccacaaacataatactgtgtcaggataagcgt
ctacagtgtttcacattccaaggtgttaaggagaaagagtggataatggagtccctcatc
cgctacatcaaggtcatcggtgggcctcagggacgggagggtctccttgttggactaaaa
aatggacagatcttaaagttgtttgtggacaacccattccccatcgcactactgaagcag
agcacatctgtccgctgtctcgacatgagtgctagtcggaaccgtctcgccgttgtggac
gaacacaacacctgtctcgtgtatgatatcaacacaaaggaactactgtttcaggagccg
aatgctaacagtgtagcatggaatacccactacgaggacatgctgtgtttctctggtaat
ggcctgctcaacatcaaggccagcaactttcccgtacaccagcagaaactacagggtttt
gtggttgggtttagtgggtccaagattttctgtctgcacatctactccatgtcagcagtg
gatgttccccagtcggcacccatgtaccagtatctcgagaaaaaactcttcaaggatgca
tacagggtggcatgtctaggggtcacagatggggactgggaagccctagcacatgaggct
ctagaggggcttgactttgacactgcaaagaaggcattcatacgcattagggaccttcga
tatctggagcttatacacaacattgaggaacgtaagaagcgcggtgagacagacaacatg
gtgtttctgggtgatgtgtacggataccagggcaagttccacgaggcagccaagctctac
aagaagtccggccaggaacacaaggccatgaacatgtacacagatctccgcatgttcgac
tatgcaaaggagttcataggttccggtgatccaatggacaaaaagatgttgataacaaag
caagcagactgggccaagagcagtaatgagcccaaggctgctgcggagatgtacatcagt
gctggggagtttgtcaaggccatcgagataattggcgatcatggatgggcggaaatgttg
attgaccttgcccgtaagctagacaaggctgaccgtgaatctctttcccgctgtgcccac
cacctggcacgcttagagcagtatggctatgcagctgaagtctacagcaagatgggagac
cacaaggcccttataatgctacatgtggacgctaaacattgggaggatgcattcacgttg
gtggagaagcaccaggagtaccgtgaggaggtgtacgtgccttacgcccagtggctcgca
gaaaatgaccgctttgaggaggcacagcaagcgttccacaaggccggtctgcaggcagag
gcagtgaaggtattggagcagctcacccacaacgctgtcattgagagtcgctttaatgac
gctgggtactacttctggaaactatccatacagtgtctggacattgccagagatgagcca
gacaagatggaggagatgttgcccaagttctacgacttccagcgtaaagctgacatgtac
tatgcctaccattccatacagagatacacagacgagccgttcacgtcacacctgcctgaa
gccttgttcaacatttcccggtacctgcttcaccagatgaacaatgatataccacatgga
atctctaaggctggcactctgtatgctctagctaagcagagtaaaaatctgggagccttc
aagctagcacggtttgcatacgacaagctgcaagctgcgaaggtaccaggaaggtttcag
gaggcagttgaccttggctccatacagatacgatccaaaccattcctggatggcgaggag
ttgttgccgatgtgttaccggtgttctacaaccaaccctctcctcaaccccggaggcggc
aaatgtgtcaactgttcacaacccttcgtaaactcatttgtttcttttgaggttcttccc
ctggtggagtttgtattggaagacgggatcacagatgaggaagctataaccatcctcgac
ctgtctgtgcctatcaaaaaggacgaggatcgcaagtggaatgagtctcgtgctggcaac
atgcagtccctgagactgggagatgaacccgaggatgaggaggaacaggaggaccccttc
tccaacaaactcctgacatttgatcaaggagacacagaattccgtccagtgatagtgaac
cgtaacgtgctgaagacattgtcacgtgcggatgtgtacatcaggaagtggccccgcccc
ctgcgacaccaatatttccgctcacttctcccagatgtctcaataactatgtgtccatgt
tgtcagaagttgttccacactgatgactttgagctgcagtacctgcaaaatggccactgt
cctttctgtcgccacaaacaggagagctga

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