Mya arenaria (softshell): 128220794
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Entry
128220794 CDS
T09995
Name
(RefSeq) retinoblastoma-associated protein-like isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128220794
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128220794
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128220794
Transcription factors [BR:
maea03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
128220794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
128220794
NCBI-ProteinID:
XP_052785297
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Position
15:complement(29278005..29329539)
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AA seq
891 aa
AA seq
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MKLFDQIMNDKLQKINWQFERLCVELGVPTYVKSRANSALEKCLSELEDDASIASHLIPF
MVYTAVIDSSNPYGLDDPHRDKSSPCCTLGEILRKSGLNFIKFSKLVRQYWDTMDLSETV
RKHISAVEKRYCIISPLFKTFEREWGTVFREEENQESIPFEKSEGTQEKKRLCWTLFLHA
KDELMYDNEELIQTYLLLLCCLEFVLRATPAFLLQPPFDTLKLETTATALTSPTRGGSSS
MLHKLADIFHTSIDELMSMHRVTQDYFQSLQAETGKLDVDMLSADYHTRQRQQGGLDELQ
FLQHEPYLMPQNNTLSQQTTTVNGTTTAVTPVRAAMNTVQQLKNLISDKTDHLEQLREHL
KNCASKPEQAIVDRVSQLKLKFLSRYLETAGSCQGHVAEQRYTQATNLYYRVMNRLLDME
QERLAQSDFSGLLGNDVFHRSLLACSAEIVLMTYNVSWSLTASALSNVDSRFTFPWVLDA
FGLYAFDFYKVLESYLKAEPNLTREIIKHLTLIENRILDSIAWKADSPVFELLSRCGSAS
SSSMSHCSDLISSETNGTSQAAEIYMSPSRGPASKGTMPGNIVFVSPRKGGVTAVYSKDS
PEPSAPDTTHRSHSLNMFLNKVCRLGYHRLKTLSDMLLILKETQQKIWTCFEFCITFHPE
LLRDRHLDQMMMCSVYGICKVSDSEIKFKDIVKAYSSLPHANSQVYKEALLDDGTTDSII
AFYNRVYMQNMKNYILLFAKPVQPNLSPLPKPVSSAITASPVYSIPGRKNFYVSPLKKSP
FKYPHSPCSMTPRSRQLYSFGEGLGSAEKLKSINESVSAFKSRSNLPYISNTKRTSSKRL
NFENMDDQSQNQSEGIQDEVGSQMVVKKIRVTPPAPITEPGQPRRNSSTTE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgaccaaatcatgaatgataaactacaaaaaatcaattggcagtttgag
aggctttgtgttgagctgggagtccccacatatgtgaaatccagggcaaacagtgctttg
gagaagtgtttgtcggaacttgaagatgatgcctccattgcctcacatctgattcctttt
atggtttatactgcagtaatagactccagcaatccctatggcctagatgacccgcacagg
gacaaatcatcaccctgttgtacacttggggaaatcctcagaaaatctggtctcaacttt
atcaagttttcgaagctggtacgtcagtattgggatacgatggacttgagtgagacggtg
cggaaacacataagcgctgtggaaaagagatactgtatcatctcaccattgttcaaaaca
tttgaaagagaatggggaacagtgtttagagaggaagaaaaccaagaatccattccattt
gagaagtcagaaggcacacaggagaagaaaaggttatgctggactttgtttctacatgca
aaagatgagctgatgtatgacaatgaagagctcatacagacctatctactccttctgtgt
tgtctcgagtttgtgttacgggcaactcctgctttccttcttcaaccaccatttgacact
ctgaaattggagactacagccacagccctaaccagtccaaccagggggggatcaagcagt
atgctccataaacttgcagacatcttccacaccagtatagatgagcttatgtccatgcac
agagtgacacaggattactttcaaagtttgcaagcagaaactggaaaacttgatgtggac
atgttgagtgcagattaccacacaaggcagcgacaacaggggggccttgatgagctacag
tttctacagcatgagccatacctaatgcctcaaaacaacacactcagccaacagaccaca
acagtaaatgggacgaccactgcagtgacccctgtccgagctgccatgaacacggtccag
cagctgaaaaacctcatatctgacaaaactgaccacctggaacagctaagagaacattta
aagaactgtgccagtaagccagagcaggcaattgtggaccgtgtgtcccagctgaagctg
aagttcctgtccagatacctagagacagcagggtcttgccagggtcacgtggcggagcag
agatacacacaggcaacaaacctgtactaccgtgtcatgaacaggctccttgatatggaa
caggagcgtctagcccagagtgactttagtggtcttcttggtaacgacgtcttccaccga
tctctcctcgcctgctcagcagaaattgtcctcatgacatataatgtctcatggtcatta
acagcatcagccctgagcaatgttgactcccggttcacattcccctgggtcctggatgcg
tttggtctgtatgcttttgacttctacaaagtgctcgagtcgtaccttaaggcagagccc
aacctcaccagggaaatcatcaagcaccttaccctgattgagaacaggattttagacagt
atagcatggaaagcagattccccagtatttgagctgctatcccgatgtgggtcggccagc
agtagtagcatgtctcattgtagtgatctcatctccagtgaaaccaacggcacaagccag
gctgctgaaatttacatgtccccaagtcgtggtccagccagtaagggcaccatgccggga
aatattgtgtttgtgtccccccgtaagggtggggtaacggctgtgtacagcaaggacagc
cctgagcctagtgcccccgacaccacccatcggtctcactcactcaacatgttcttaaat
aaagtatgtagattgggctaccacagattaaagacactcagtgatatgcttctaatattg
aaagaaactcaacagaagatctggacgtgttttgagttctgcatcacatttcacccagaa
ttgttaagagacagacatcttgaccagatgatgatgtgttcagtgtatggtatctgcaag
gtgtctgacagtgagatcaagttcaaggacattgttaaagcctatagctccctgcctcat
gccaactcgcaggtgtacaaggaggcattactagatgatggcaccacagactccatcatt
gccttctacaatagagtctacatgcagaacatgaagaactacattctcctatttgccaaa
ccagttcaaccaaacctgtcacccctgccaaagcctgtgagctctgctattactgcttct
cctgtttacagcatcccaggtcgtaagaatttctatgtgtctcccctgaagaagtcgccc
tttaagtatcctcactccccctgcagtatgaccccacggtcccgacagctgtacagtttt
ggagaggggctagggtctgctgagaagttgaagagcatcaatgaatctgtgtctgcattt
aaatcccgcagtaacctgccatacatatccaacaccaagagaacatcatcaaaacgactc
aactttgagaatatggatgaccagtcacaaaaccagagtgagggcattcaggatgaagta
ggcagccagatggtggtgaaaaagatacgtgtcaccccacctgcacccatcacagaaccc
ggccagcctcgcagaaacagtagcacaacagaatga
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