Mya arenaria (softshell): 128223841
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Entry
128223841 CDS
T09995
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04137
Mitophagy - animal
maea04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128223841
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128223841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128223841
04121 Ubiquitin system [BR:
maea04121
]
128223841
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128223841
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128223841
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128223841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF3_RING
CEP104_ZnF
zf-C3HC4
zf-C3HC4_2
AAA_13
VPA1267
CC_Cfap43
TRAF2_zf
Tropomyosin
Zein-binding
CCDC57_N
Ribosomal_S27e
DUF3287
zf-TRAF
Med4
Motif
Other DBs
NCBI-GeneID:
128223841
NCBI-ProteinID:
XP_052789231
LinkDB
All DBs
Position
17:complement(20199351..20216213)
Genome browser
AA seq
513 aa
AA seq
DB search
MSIGGYPAELFGEGLVDEKYFCIICKKVLREPTQAYCGDRFCRSCQRTLFPDGVTAVECP
RPECMDEDNPSQRTIIKDAEIFPDNAIRRELFRLHVQCINVGCEWKGKYREFETHFPVCE
FRLEACSHCNQPVRVLEMQVHVQQFCPEVFVKCPDCGEDIKRVLFGDHQRSHSNIQCPAC
PPGSNPISKEEFQAHFNDCQHSGYVFAQLQRLEQHVGSTEQDLGETKRQLTDKFTEIEAN
IRQVAANAPPNSGFSGSLPPDLNLDQKIRQLFEQMAVSLNERVDTKTGTFEGIANTLHRE
LEKSITAIEKLDRHRRLESEKAEASQQKIKSLERTIAAKDAKISELEMKLKDVEVSCYDG
MFIWKVSDFSQKQQDAIQGRSISIYSNPFYTRKFGYKMCGRLYPNGDGMGKGSHMSVFFV
IMRGEYDALQPWPFKHRVTFCLLNQEGGNATVDSFRPDTTSSSFKRPTTNMNIASGCPLF
IRLDTLTNPTNGFLKDDTLFLKMIVDISDFKEA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagcataggcggctatccggctgaattgtttggcgaaggcttagtagatgagaaatac
ttttgtattatttgcaagaaagtacttagagagccaactcaggcctactgtggggacagg
ttttgtaggtcatgtcaaaggactctttttccagatggggttacagcagtggaatgtccg
cgtcctgagtgtatggatgaagataatccctcacagagaaccattatcaaagatgcagag
attttccctgataatgccataagaagggagcttttccgcctacatgtacagtgtataaat
gtgggttgtgaatggaagggaaaatatagggaatttgagactcattttccagtgtgtgaa
ttccgattggaagcgtgttcccattgtaatcagccagttcgagttttagaaatgcaggtg
catgtgcaacaattttgcccagaagtgtttgtgaagtgtccggactgtggggaagatata
aagagagtattgtttggggatcatcagagaagccactcaaatatccagtgtccagcctgt
ccaccaggatctaatccgatcagcaaagaagagtttcaggctcactttaatgattgtcaa
cacagcgggtatgtttttgcacagttacagcgtcttgaacaacatgttggtagtactgaa
caagaccttggtgagacgaaacgtcagttaaccgataagtttacagaaatcgaggcaaat
ataagacaggttgctgcaaatgcacctccaaactctggattttccggtagcttaccacca
gatttaaacctcgaccaaaagattcgccaactttttgaacagatggcggtcagtctgaac
gaaagagtggacacaaaaactggaacctttgaaggtattgctaacacccttcaccgagag
ttggagaagtcgataactgctattgaaaagcttgatagacatcggcgtcttgaatctgaa
aaggcagaagcaagtcagcagaagataaagtctcttgaaagaacgattgctgcaaaggac
gctaaaatttcagaacttgaaatgaagctgaaggatgtggaggtttcttgctacgacgga
atgtttatttggaaagtctcagatttttcgcagaaacagcaagatgcgattcaagggaga
agcatcagtatctactcaaaccctttttatacgcggaagtttggctataagatgtgcggt
cgtctttacccaaatggagatggcatgggaaaaggctcgcacatgtcggttttctttgtc
attatgagaggggaatacgatgccttgcagccttggccattcaagcatcgcgtaacattc
tgtcttttaaaccaggagggtggcaatgcgactgttgattcattcagacccgatacaaca
agctcctctttcaagagacccacaacaaacatgaacattgcctctggatgtccgcttttc
ataagacttgacactcttacaaacccaaccaacgggttcttgaaggatgataccttgttc
ttgaaaatgatagtcgacatttctgattttaaggaggcataa
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