KEGG   Mya arenaria (softshell): 128227213
Entry
128227213         CDS       T09995                                 
Name
(RefSeq) actin-5-like
  KO
K05692  actin beta/gamma 1
Organism
maea  Mya arenaria (softshell)
Pathway
maea03082  ATP-dependent chromatin remodeling
maea04145  Phagosome
maea04814  Motor proteins
maea04820  Cytoskeleton in muscle cells
maea05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128227213
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128227213
  09142 Cell motility
   04814 Motor proteins
    128227213
   04820 Cytoskeleton in muscle cells
    128227213
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    128227213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maea03021]
    128227213
   03019 Messenger RNA biogenesis [BR:maea03019]
    128227213
   03036 Chromosome and associated proteins [BR:maea03036]
    128227213
   03029 Mitochondrial biogenesis [BR:maea03029]
    128227213
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:maea04812]
    128227213
   04147 Exosome [BR:maea04147]
    128227213
Transcription machinery [BR:maea03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     128227213
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     128227213
Chromosome and associated proteins [BR:maea03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     128227213
    NuA4 complex
     128227213
  Chromatin remodeling factors
   BAF complex
    128227213
   PBAF complex
    128227213
   GBAF(ncBAF) complex
    128227213
   SWR1 complex
    128227213
Mitochondrial biogenesis [BR:maea03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    128227213
Cytoskeleton proteins [BR:maea04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     128227213
Exosome [BR:maea04147]
 Exosomal proteins
  Proteins found in most exosomes
   128227213
SSDB
Motif
Pfam: Actin GerD DUF6581 RNA_helicase_helical
Other DBs
NCBI-GeneID: 128227213
NCBI-ProteinID: XP_052793477
LinkDB
Position
3:complement(28669366..28671678)
AA seq 379 aa
MSQINDEEIASVVIDNGSGMCKAGFAGDDAPRAVFPALTGRPRFDIVMAGMGGKDTYIGD
EAQSKRGILSLRYPVEHGIVTNWDDMEKIWHHTFYNELRVAPEDQPVLLTEAPLNPKANR
ERMTQIMFETFNTPAFYVAIQAVLSLYASGRTTGVVFDAGDGVSHVVPIYEGYALPHAIE
RMNLAGRDLTHYLKKILTERAYNFTSSSETEIVRDIKEKLCYAALDFESEMDSAAKSSVV
EKSYELPDGQVITIGNERFRCVEALFQPSFLGMENGGVHELLHNSVQKSDIDIRRDLWNN
VILSGGSTMFPGIADRMKKELDALVPANMKVKVIAPPERKYSVWIGGSILSSLTSFSQMW
ISKQEYEECGPGIVHRKCF
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgagtcaaatcaatgacgaagaaattgccagcgttgtcattgacaacggctccggaatg
tgcaaggcggggttcgcaggcgatgacgctccccgggcggtgtttcctgcgctcaccggg
cgcccaaggttcgacatcgtgatggcgggaatgggcgggaaagacacgtacatcggagac
gaggcacaaagcaaacgcggaattctgtcgcttcgttacccagttgagcacggcattgtc
accaactgggacgatatggagaagatctggcatcacacattctacaacgagctccgggtg
gcgcccgaggaccaacccgtgctgctgacagaggcgcctcttaaccccaaggccaatagg
gaacgtatgactcagatcatgtttgagacattcaacacgccggcattctacgtcgctatt
caagctgtattgtcactgtatgcgtctgggcggacgacgggggttgtttttgacgctggt
gacggtgtatcccatgtggtacctatctacgaggggtacgcgctgccacacgctattgag
cgcatgaatcttgccggaagggacctcacacactatcttaagaaaatcctgactgagcgg
gcatacaattttacatcttcgtctgaaacggaaatagtgagggacataaaggagaaactg
tgttacgcggccttggactttgaaagtgaaatggactcagcagcgaaatcttcagtcgtt
gaaaagagctacgagctccctgacggtcaggtgatcaccattggtaacgagcgtttccgg
tgcgtggaggctctgttccagccatccttcctgggcatggagaacggtggcgtccatgag
ctgctgcacaactcagtccaaaagagcgacatcgacatccggcgggacctttggaacaac
gtgatcctctccggtggctcaacgatgtttcccggcatcgccgaccggatgaagaaggag
cttgatgcgctggttcccgccaacatgaaagtgaaggtcatcgcgccgcccgagcggaag
tactcggtgtggatcggcggctccatcctgtcctcactcacctccttcagccagatgtgg
atctccaagcaggaatacgaagagtgcggaccaggcatcgtccataggaagtgcttctaa

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