Mya arenaria (softshell): 128234286
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Entry
128234286 CDS
T09995
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128234286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128234286
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
128234286
Complex C
U5 SnRNP specific factors
128234286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
Roc
Septin
Motif
Other DBs
NCBI-GeneID:
128234286
NCBI-ProteinID:
XP_052804409
LinkDB
All DBs
Position
1:complement(46762812..46783890)
Genome browser
AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYVGPELDSDDDDSDDSGEDEDAEKYPDYAGADDEEDMEQDDDEGGDMQV
VLHEDKKYYPTPEEVYGPEVETIVQEEDTQPLTEPIIAPVKKKKFSMAEQDLPDTVYNME
FLADLMDTPELIRNVTLCGHLHHGKTSFVDCLMSQTHPELEVKDDRDIRYTDTLFTEQER
GVSIKSTPVTLVLPDTRNKSFLLNVFDTPGHVNFSDEVTAALRISDGAVIFVDAADGVML
NTERFIKHAIQEKLPVCVCINKIDRLILELKLPPADAYFKLRNILDEVNGIISLYSEDTE
PQQVSPLNGNVCFASAYYRVCFSLGSFSRIYADTYGGINDKEFARRLWGDMYFHSKTRKF
SKKPPNSTAPRSFVEFILEPLYKIFAQIVGDVDESLPRVCDELGISLTSEEKKLNIRPLL
RIICRRFFGDFTGFVDMCVEHIKSPLANARRKIEHIYTGPMESDLVDMMVQCDSDGPLMV
HTTKLYPTPDATSFHVFGRVVSGTLYSNQEVKILGENYTIQDEEDSRFGQVGRLWISEAR
YKVEVNRVPAGNWVLIEGIDQPIVKTATITDTTAPEEVHIFRPLKFNTNSVIKIAVEPVN
PSELPKMLDGLRKVNKSYPLITTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEIVQITWPRKRLGE
FFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKSLLGAVKDSIVQGFQWATRE
GPLCDEPIRNVKFKILDAVIAQEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYYFVEV
VAPADCVSAVYTVLARRRGHVTQDSPVAGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAF
CLSVFHHWQIVPGDPLDKSIHIRPLEAQPATHLAREFMVKTRRRKGLSEDVSINKFFDDP
MLLELAKQDVLLSYPM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgacctctatgatgagtttggtaactatgttgggccagaacttgacagcgat
gatgatgacagtgatgactccggggaagacgaagatgctgagaaatacccggactacgct
ggcgctgatgacgaggaagatatggaacaggacgatgatgaaggcggggacatgcaagtg
gtgttacacgaggacaagaagtattacccgaccccagaggaagtttatggccctgaggta
gaaactattgtacaagaagaggacacccagccgctgaccgagcctataatagccccagtg
aagaagaaaaagttctccatggctgaacaggacctaccagacacagtttacaacatggaa
tttctcgctgacctaatggacactccagagttaatccgtaacgtcactctgtgcggacac
cttcaccacgggaaaaccagctttgttgactgcctcatgtcccagacacatcctgaactc
gaggttaaagacgaccgtgacattcgatacactgacacattgtttacggagcaggaacgc
ggagttagcatcaagtctacgccagttacactcgttctccccgacacacgaaacaagtcc
ttcttgcttaacgtcttcgatactccaggtcatgtcaacttctcagatgaggtgacggct
gcactcagaatcagtgatggagctgttatatttgttgatgctgcagatggggtgatgttg
aacacagagaggtttatcaagcacgcgatacaggagaagcttccggtatgtgtgtgtatc
aacaagatcgatcgcctcattctggagctgaaactgccgcccgcggacgcgtacttcaag
ttgagaaacattctcgatgaggtcaatggaattatcagtctctactcagaagacacagag
ccgcagcaagtatcgccactgaatgggaatgtgtgttttgcgagcgcctactaccgggtc
tgcttctcactgggatcgttcagtcgtatatacgctgacacgtatggcgggattaacgat
aaagagtttgctcggagactgtggggcgatatgtactttcatagcaagacgaggaaattc
agcaaaaagcctccaaattccacagcaccgagaagttttgttgagtttatactggagccc
ctctacaagatatttgctcagattgttggagatgttgatgagagccttccccgagtctgt
gatgagctgggaatctcgctcaccagtgaggagaagaagctcaacatccggccgcttcta
cgcatcatctgtagacgattcttcggagactttacaggttttgtggacatgtgtgtggag
catatcaagtcaccgctggcaaatgcccgacggaagattgagcacatctacacaggaccg
atggagtcggatctggttgatatgatggttcagtgtgactctgatggtcctctgatggtc
cacaccaccaaactctacccgaccccggacgccaccagctttcacgtgtttgggcgtgtg
gttagtggcacactgtactcaaaccaagaagtgaagattcttggagaaaactacacaata
caggacgaagaggattcgagattcggccaggtcggcaggctgtggatttcagaagccagg
tacaaggtggaagttaaccgtgtgcccgctggtaactgggtgttgattgaaggtatagat
cagcctatagtgaagacagccaccatcactgacactacagccccggaagaggtacacata
ttccggccgctgaagttcaacacaaactctgtgatcaagatcgcagtggagccggtgaac
ccttcagaacttcccaagatgttggacgggctgagaaaggtcaacaagagctaccctctc
attacaaccaaggttgaggagtcaggagaacacattatcctgggcacaggagagttgtac
cttgactgtgtgatgcatgacctccgcaagatgtactctgagattgacattaaggtggca
gaccccgtcgtgtccttctgcgagactgttgtggaaacatcttctctcaagtgcttcgcc
gaaactccaaacaaaaagaacaagttgaccatgattgcagaaccactggagaaaggctta
gctgaggacatagagaatgaaattgttcagataacatggcccagaaaacggctcggagag
tttttccagaccaaatatgactgggatttgctggctgcgagatctatatgggcattcggg
cctgattctactggccctaatattcttgtggatgatacattgccatctgaagtggacaag
agcctgctaggagccgtcaaggacagcattgtgcagggattccagtgggcaacaagagag
ggaccattgtgtgacgaaccgatccggaatgtgaagttcaagattctggatgcagtcatt
gcccaggagccgatacatcgaggtggaggtcagatcatcccgacagcccgacgtgtggca
tactccgcattccttatggctacacccaggatgatggaaccgtactactttgtggaggtc
gtcgcccctgctgactgtgtatctgctgtctacactgtactggccaggagaagaggtcat
gtgacccaagattctcctgtcgccggttcaccattgtacaccattaaagccttcctaccg
gcaattgactcgtttggctttgagacggatctccgcacacacacacaaggccaggcattc
tgcctctctgtattccaccactggcagatcgttccgggcgatccgctggacaagagtatc
cacattcgtccccttgaggctcaacctgccactcatttagctcgggagtttatggtgaag
actcgtagaaggaagggtctgagcgaggatgtgagtatcaacaagttcttcgacgatcct
atgttgttggaattggcgaaacaagatgtgcttctcagctaccctatgtag
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