Mya arenaria (softshell): 128239173
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Entry
128239173 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128239173
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128239173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128239173
Membrane trafficking [BR:
maea04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128239173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
128239173
NCBI-ProteinID:
XP_052811637
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All DBs
Position
6:complement(39116571..39143795)
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AA seq
1099 aa
AA seq
DB search
MFSADAGAAQISMLSSRATKSEQPVVEHDPFQYLFPKLPDQGSYSVAHNGKCDIEEDFIM
IAEFSEQEGPRPVIVIPKDGGQNFDQNEFSIKIMSVDHQSSVVGGYETAEDAQVVMCDEE
AGTYAFVHHIVLNDIQARGYVRPFCISYVTSDPLKIMRCYEEISTQMKKVARFMKYGNRL
VFMRDLEKKLEDLSYTKAHLLISQSRSAVSTQGDSELLAALNTIRQCMEEATDIVSALQP
QLQGDIDLADRFQQYERMVQTRHRGPSMDSDSTSLQDFTDSPPSANNTKEHSGSYCDGFL
AEFSLFSKSKNQKPKVLDVSAIRGKRRFDRSLRGLHELCSWGAKEGLQRLRAFREFLKQE
FATIYNDGLDMAALDPESGVLRFGYHTVGANFLLHKDSGPESFVNRLHSFGGEVNIPSLG
SVDSFKSFVTPFQSFDEDTMYSATSSLDNMFNYSRQTSVSDPPLSRNQSDPQLEDTELIF
VHDYAASEFENTLTMENPMDEGLSKGETLDAGKTIADSHEQVSKDADRENKNRSDSDTSE
FYAIDLDKDLKCSAKGCRCNTVDIKCDNQIGAGCRKTVKSRDEDIGRVKKTGICEVSEKV
ETDCDKLAKCNDENGYKKKISRDSRLNISNKIENFVLNLGLTDNTTTLCCSGAADRFEDV
TDVSDVVQEQKVVSDVVNENKHLDDLLNAQKDIIDVVNGQKELTDVVNGQKELTDVVNGQ
KELTDVVNGQKELTDVVNGQKELTDVVNGQKELTDVVDGQKEPMDVDNKQKGFSDRFESD
FESKDQYDLNESKQGNEDSSGDMFVFGKEPLRGSLTKRLSNSASSDSVKDESHLKKKWRL
FQPNRLLLDGDFSVAQSLHKVLCNYSNLQHVVYSLLVGRPVIVIGTRKQESAIREMIQAL
ALFVSSTPRTSSVCMLCQLKQLKMADIHKVQLRGIIRPDKRSAEYLLPQSIRRYITIVDT
ERGLILCQPYQGQFLSFLSALQLKKKTFKTGNVLLPFLQLCLEEISTKAFSYYHNVMSSD
CLQDFRDASFPHRAAMLELSSEKYLNRAGIMNSDCRIIKHLAEAVKVQQIEEEFQCKYLT
DAPAFPFSVQHQSLQTFKL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgctgatgcaggtgctgctcagatctccatgctgagttcaagagcgactaag
tcagaacaaccagttgttgagcatgatcctttccagtatttatttccaaagttgccagac
cagggttcatacagcgtagcacacaatgggaaatgtgacatagaagaagacttcattatg
attgctgaattttcagaacaggaaggaccaaggccagtgattgtgattcccaaagatgga
ggccagaactttgaccagaatgaattttcaatcaaaataatgtcagttgatcaccagtct
tcagttgttgggggttatgagacagctgaagatgcccaggttgttatgtgtgatgaggaa
gcggggacttatgcttttgttcatcatattgtgctgaatgacatccaggcccggggctat
gttagacccttctgcatcagttatgtcacatcggaccctctaaagattatgagatgttat
gaagaaatttcaactcagatgaaaaaggttgcaagatttatgaagtatggaaacagactg
gtgtttatgagagacttggagaaaaagctggaggatttaagctatacaaaagcacacctg
ctgatctctcaaagtcgaagtgctgtgagcacacagggagactcggagctgcttgcagcc
cttaacaccattcgacagtgtatggaggaagccactgatattgtctctgcactccaacca
cagctacagggtgacattgacctagcggatcggttccagcagtacgagaggatggtccag
actcgtcatcggggaccaagcatggattccgactccactagtctgcaagatttcacagac
agtccaccatcagctaacaatacgaaagagcattctgggtcctactgtgatggattccta
gctgaatttagcttgttcagcaaatcgaaaaatcagaagccaaaggtcttggatgtgagt
gctatcagggggaagcggcggtttgaccgatcactccgtggacttcatgagctgtgttcc
tggggcgcaaaggagggccttcagaggctccgggcatttagagagttcctgaagcaagag
tttgccaccatctacaatgatggactcgatatggcagcacttgatcctgagagtggagtg
ttgaggtttggctatcacacagtcggggcgaacttcctcctccataaagatagtggaccg
gagagttttgtcaaccggctgcacagctttggtggagaagttaacattccatcgctaggc
tccgtggacagtttcaagtcgtttgtgactcctttccagtcgtttgatgaagataccatg
tattctgccacttctagtctggacaatatgttcaactattccaggcagacgtcagtgtct
gacccaccactctcaagaaaccagtcagacccacagttagaagacacagagttaatattt
gtccatgactatgctgcaagtgaatttgagaacactttaactatggaaaatcctatggac
gaaggcctttctaaaggggagacactcgatgcaggaaaaaccattgcagactcacatgag
caggtgtcaaaagatgcagatcgggaaaataaaaatcggtccgactccgatacatcagaa
ttctacgcgatagatttagataaagacttgaaatgttcagctaagggatgcaggtgtaat
actgtagacattaaatgtgataatcagattggtgcaggatgtaggaaaactgtcaaaagt
agagatgaagatataggcagagtgaaaaagactggtatttgtgaagtgtcggagaaagtt
gaaacagactgtgataagttggcaaagtgcaatgatgaaaatggatataaaaaaaaaatc
tctcgcgattcacgtctgaatatttcaaacaaaattgagaattttgttttgaatctgggt
ttaactgataatacaacaactttgtgttgttcaggtgctgctgatagatttgaagatgtt
actgatgttagtgatgttgttcaagaacaaaaggttgtaagtgatgttgtaaatgaaaac
aaacaccttgatgatttgcttaatgcacaaaaagacataattgatgttgtcaatggacaa
aaagagcttactgatgttgttaatggacaaaaagagcttactgatgttgtcaatggacaa
aaagagcttactgatgttgtcaatggacaaaaagagcttactgatgttgtcaatggacaa
aaagagcttactgatgttgtcaatggacaaaaagagcttactgatgttgttgatggacaa
aaagagcctatggatgttgataataaacaaaaaggttttagtgacagatttgaaagtgat
tttgagtcaaaggatcagtatgacttaaatgagtccaaacaaggtaatgaagacagttca
ggcgacatgtttgtgtttgggaaagagccattacgtggaagtctgactaaacggctgagt
aattctgcctcgtctgactccgtgaaagacgaaagtcatttgaagaagaaatggaggttg
tttcagccaaacagattgcttcttgatggggatttctctgtggcccagagtctacacaaa
gttctatgtaactatagcaacctgcagcatgtagtttacagcctgttggtagggcgacca
gtgatcgtcataggaacaaggaaacaggagtcagctatcagagaaatgattcaggcactc
gccctgtttgtttcatcaacaccaagaaccagttcagtatgcatgctgtgtcagctgaag
caattaaagatggctgacatccacaaggttcaactacgaggcattatacgtccagacaag
cggtcagcggagtatcttctgccacagtcgatcagaaggtatatcacaatcgtggacaca
gaacgaggcttgatcctgtgtcagccgtaccagggccagtttctctccttcttgtcagcc
ctccagttaaagaaaaaaacgttcaagacgggaaatgttctccttccattcttacagctc
tgtctggaggagatctctaccaaggcattcagttactaccataatgtgatgtccagcgac
tgcctgcaggacttcagggatgccagtttcccacatagagccgcgatgttagagctttcc
tcagaaaaatatctaaacagagcaggaattatgaactctgactgcagaattatcaagcac
ttggcagaggctgtgaaggttcaacagatcgaggaagagttccagtgtaaatatctcaca
gatgcgccggcatttccgttcagtgtacagcaccagtcgttgcagacattcaagttgtga
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integrated database retrieval system
