Mya arenaria (softshell): 128240186
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Entry
128240186 CDS
T09995
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like
KO
K08539
vitamin D3 receptor
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128240186
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128240186
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128240186
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128240186
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128240186
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128240186
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
nSTAND2
Motif
Other DBs
NCBI-GeneID:
128240186
NCBI-ProteinID:
XP_052812667
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Position
7:complement(28710923..28713681)
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AA seq
543 aa
AA seq
DB search
MADLAQLFCDNDSFVKEYHNSTFTIELLPALDNDHLELNGSMLSLIDMVHRTPSDDISSN
TTESSSPPTDFMLSPWNSSSDAERSCDIIDLKDVCRTEHMYQKQTEEHSPADDNIHDDNV
RPNRETAKLKFPPCYVCGAKACGCHYGVISCAACKGFFRRYLLRKNSYTCKKGGNCVISF
KSKVHCKSCRIKKCKEVGMSKEKSSIGRYKLSKRTETIIEAKTLTDADKQVAEDGDKEEQ
DKTQEIDMDLDAVLDIVCSKLSHCSIGSEKPKEFTNDVVTKMAELLGNMRFYSAGNIKDE
DMPKALEYAAENHKRRKELFGSLKAISWTEFTEIYRQHGLDIDGRVADMELQTQVLDGWL
DNACGFLKEIPLFLSLPVRDQVNLIKASIDEIDILLSFREFSAEHKIFIKSGGVYHEEDV
VDKYISKRNFDQLLHCLVKLQKLNPNPTELALMCALAVFSTGRCKLLNPKLVEKCQVMTA
DRLQLEVKRQHPDSSGKFSKIMDCLVDTRGISDMFNDDYQEYFTNEIVREKMPVWGELKP
ETD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttagctcaactcttctgtgacaatgacagttttgtgaaggagtaccataat
tcgacctttacaatcgaactattgcctgcgttggataacgaccatctcgagctaaatggg
tcaatgctgtcgttgatcgacatggtccatagaacacccagtgacgatatttcatccaac
acaacagaaagcagcagtcctcccacggacttcatgctatcgccgtggaattccagttct
gatgccgaaagaagttgtgatatcattgacttaaaagacgtgtgtagaacggaacatatg
taccaaaagcaaaccgaagaacactcaccagccgatgataacatacacgatgataatgta
cggccaaatcgagaaaccgctaaacttaagtttccaccttgttatgtgtgcggtgctaag
gcatgtggttgtcattacggcgtcatttcatgtgcggcatgcaaagggtttttcagaagg
tacttgttaaggaagaacagctacacttgtaaaaaggggggtaattgtgtgataagtttt
aagtcaaaggtgcactgtaaaagttgccgaataaaaaaatgcaaagaggtggggatgtca
aaggaaaagtcgagtataggtagatacaaactatccaagcggacagaaaccataattgag
gcaaagactttgacagatgcagacaaacaagtggcggaagatggtgataaagaagagcaa
gataaaacccaagaaattgacatggatttagacgcagtgctagatattgtctgctcaaaa
ttgtctcattgtagcatagggtctgaaaagccgaaagagtttactaatgacgtagttacg
aaaatggcagaactattaggtaacatgcgattctatagtgcgggcaatataaaggatgaa
gatatgccaaaagctcttgaatatgcggcagaaaatcataaacggagaaaagaactgttc
ggaagtttgaaggcaattagttggactgagtttactgaaatataccggcagcacggactt
gatatagatggacgggtagctgacatggagttacagactcaggtactggacggttggctt
gataacgcgtgcggctttttaaaagaaataccattgtttttgtctctgccagtgcgtgac
caggtcaatcttattaaagcaagtattgatgaaatagatatcttgttaagctttcgagaa
tttagtgctgaacacaaaatcttcataaaatcgggaggggtctatcatgaagaagacgta
gtagacaaatacatttcaaagcggaactttgatcaactgttacattgccttgtcaagcta
cagaaactcaatccaaacccaacagaacttgcgttgatgtgtgcgttagctgtgttctca
accggtcgatgcaaacttttgaacccaaaattagtcgagaagtgccaagtcatgacggcc
gatcgtctgcagctggaagtgaaaagacaacacccggactcgtctggaaagttttctaaa
atcatggactgccttgtcgacacaaggggtatttctgacatgtttaatgacgactatcaa
gaatatttcaccaacgagattgtgcgagagaagatgccagtttggggggaacttaaacca
gagacagactag
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